KEGG   Alnus glutinosa (common alder): 133874623
Entry
133874623         CDS       T10577                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aglu  Alnus glutinosa (common alder)
Pathway
aglu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133874623
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aglu03019]
    133874623
   03041 Spliceosome [BR:aglu03041]
    133874623
Messenger RNA biogenesis [BR:aglu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133874623
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133874623
Spliceosome [BR:aglu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133874623
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 133874623
NCBI-ProteinID: XP_062168476
LinkDB
Position
8:21432534..21438220
AA seq 437 aa
MDPTKKRKLEENGAVPPSTDVDAAVAKLTPEDVRKIVDRIEKDKLLDIVAAAAARHVDVL
DGVRALADSDSSQRKLFIRGLGWDTTTDGLRALFSSYGELEEAVVILDKQTGKSKGYGFV
TFKHVDGALLALKEPSKRIDGRVTVTQLAAAGNTGGNANTNTVDVAMRKIYVWEVPHDMS
PDKLLSHFSSYGEIEEGPLGFDRFTGKSKGFALFVYKTVEGAQAALGNPVKMIDGRQLNC
KLANVDAKKGKQGGPLGQPGTDGVQGPVGSTGNDGMGMGMGMGMAQGGSIPVSQYGGPGS
MGTYGGFPGGPPMGHHPLNSTSLGGPGLSSVNSQVPSSLGGTAGFGTGLGGPYGGYGGIG
GTGGGLGAGGGGSASLYRLPPSSVGMPSGGYPESGHYSLSSASSGYQSQHHQPAGTSPVP
RVPPGAAGMYPNVPHYF
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggacccgaccaagaagcgaaagctggaagagaacggcgccgtccccccctccaccgat
gtggacgccgccgtcgcgaaactcaccccggaagacgtccgcaaaatcgtcgaccgcatc
gagaaggacaagctcctcgacatcgtggcagccgcggctgctcgccacgttgacgtgctt
gatggcgtgcgagccctggcggactcggactcgtcgcagcgcaagctcttcattcgcggc
cttggttgggacaccaccactgacggcctccgcgccctcttctcatcctacggcgagctg
gaggaggccgtggtcatcctcgacaagcagaccggtaagtccaagggctacggcttcgtc
accttcaagcacgtcgacggcgctctcctcgccctcaaggagcctagcaagcggatcgac
ggtcgcgttaccgtcacgcagctcgctgcggctgggaatacgggtggcaacgccaacacc
aacaccgtcgatgtggcgatgcgcaagatctacgtctgggaggtgccgcacgacatgtcg
ccggataaactcttgtcccacttctcgtcgtacggggagatcgaagaggggccacttggg
ttcgataggttcaccgggaagtcgaaggggttcgcgctgttcgtgtacaagaccgtggag
ggggcacaggcggcgttggggaatccggtgaagatgatcgacgggaggcagttgaattgt
aagttggcgaacgtggatgcgaagaaagggaagcaaggggggccgctgggtcagcccggg
accgatggggttcagggcccggttgggtctactgggaacgacgggatggggatgggaatg
ggaatgggcatggcgcagggtggttcgattccggtgtctcagtacggcgggccaggctcg
atgggcacgtatggtgggtttccgggtgggccaccgatggggcatcatccattgaactcg
acttcgttgggagggccggggttgtcgtcagtaaatagccaggtgccatcgtcgttagga
gggactgctgggtttggtactgggctgggtgggccttatggtgggtatggtggcattggt
gggactggtgggggattgggtgctggtggtggtgggtcggcttcgttgtatagattgccg
ccaagttctgtgggaatgccctctggtgggtatccggagagtgggcattatagtttgtcg
tcggcttcgtctgggtaccagagtcagcaccaccagccagcgggaacctccccggtgcca
agggttccacctggcgctgcgggcatgtacccaaatgtgcctcattacttctga

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