Alnus glutinosa (common alder): 133874753
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Entry
133874753 CDS
T10577
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133874753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aglu03021
]
133874753
03036 Chromosome and associated proteins [BR:
aglu03036
]
133874753
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133874753
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133874753
PBAF complex
133874753
GBAF(ncBAF) complex
133874753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
133874753
NCBI-ProteinID:
XP_062168614
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All DBs
Position
8:868077..872481
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AA seq
562 aa
AA seq
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MEITPHDPTSKPLRPDEPELDLYTIPIHSSWFLWDEIHETEKTELREFFDGSSFSRTPKT
YKEYRDFIINKYREEPSRRLTFTDVRKSLVGDVSLLQKVFRFLEKWGLINFGAPLGIDSS
SFVVVEDEEDMSRVKIEGVVPNAVRVGGSPNSPKPILVPPSVRHNAVGNGFNLPPLASYS
DVFGDLVKPKGLVCGNCGGNCDSDHYKYTKGEFIICINCFKNQNYGENRSMDEFKHNECD
EGSGKRGAIWTEAETLLLLESVLKHGDDWELVAQNVQTKNKRDCVLKLIELPFGELMLGS
AHKYGNFGGPNGNMNSAKQVQLSSSEYHETIKTDGQCHEQNDEREQNGDAVEQGPPSKRQ
RITSLSDAGSSLMKQVALISTMVGPRITAAAAEAAVTAICDENSFPREIFDVEEDYVSNG
LCSPTTSYKSERVPQEEDSEMKERSTKAETQDTSLKKDDIPLTLRIRASIATALGAAASR
AKLLADQEDREIENLVAIIIETQMKKLHHKAKHFEDLGMIMEKEFDEMEELKSSLLAERI
EVIQGAVNAGISRWRDHSAVKS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcacaccacacgacccgacttctaaaccgctccgacccgacgaaccagagctc
gacctctacaccatcccaatccactctagttggtttttgtgggacgaaatccacgaaact
gagaagaccgaattgagagaattcttcgatggaagctctttctcaaggacgcctaaaact
tacaaggaatacagggactttatcatcaataagtacagagaagagccttcgaggcggctt
accttcaccgacgtccgaaaatcactggtgggtgatgttagtttgctccaaaaggtcttt
aggttcttggagaagtgggggttgatcaatttcggtgcgcctttgggtatcgatagtagt
agtttcgttgtggtggaggatgaggaggacatgtctagggttaagattgagggagttgtc
cccaatgcagttcgggtaggggggtcgccgaattcaccaaagcctattttggtgccccca
agtgtgaggcataatgcagttgggaatggattcaatttgccacccttggcgtcgtattcg
gatgtttttggtgatttggtgaagccgaaggggttggtttgtgggaattgtggcggaaat
tgtgactctgatcactataaatataccaagggcgaattcattatttgcataaactgtttc
aaaaatcaaaattatggcgagaacaggtcaatggatgaattcaaacacaatgagtgtgat
gaaggcagtggtaaacgtggagctatctggactgaggcagaaaccctacttcttttagaa
tctgtattgaagcatggggatgactgggagcttgttgctcaaaatgtccaaaccaaaaat
aaacgtgattgtgtattgaaactcattgaactgccatttggagagcttatgcttggttct
gcccacaagtatggtaattttggtggccccaatggcaacatgaacagtgcaaaacaagtt
cagttatcttcatctgagtatcacgagactatcaaaacagatggtcaatgtcatgaacag
aatgatgaaagagagcagaacggagatgctgtggagcaaggtcctccttcaaaaagacag
cgcattacttccctttcagatgctggtagttcattaatgaaacaggtagctctcatatca
accatggttggtcctcgtattacggctgctgcagctgaggctgctgtcacagcaatttgt
gacgagaactcatttccaagagagatctttgatgttgaagaggattatgtttctaatgga
ttatgttctcccactacaagttacaagtcagagagagtccctcaggaagaagattctgag
atgaaggaaaggtccactaaagcagaaactcaggatacatccctaaagaaagatgatata
cctctaactctgcgaattagagcttccatcgcaacagctcttggggcagctgcttctcgt
gctaaattattagctgatcaagaagacagagagattgaaaatttagtggcgatcataatt
gagacacagatgaaaaaattgcaccacaaagccaagcattttgaagatctggggatgatc
atggagaaggaatttgatgaaatggaagaactaaaaagttctcttttagcagagcgaatt
gaagtcatacaaggggcagttaatgctggtatctcaagatggagggatcattctgctgta
aaatcttga
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