Alnus glutinosa (common alder): 133874857
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Entry
133874857 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133874857
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03015
mRNA surveillance pathway
aglu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133874857
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133874857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133874857
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
133874857
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
133874857
NCBI-ProteinID:
XP_062168727
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Position
8:complement(28880543..28884722)
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AA seq
708 aa
AA seq
DB search
MDEGEGGYGEGTDQMDQFHRNEAISAVADEGFLGEEDDDYEDLYNDVNVGEGFLQSLRKG
EEVGFKNEEEKKKVELPSPRVAPEVHNVSIPGVGEGSGNGSGGGARVSGYQINQGFRGNE
VKGTVGSGGGGIRVELGQSGMMSKSQVNEVEEQSGNNNSSLIIQGIGRGQQSHGGVGNVG
NEGLVRQSGGGGVGGGGSVNGIGGNGVGNSGGVGVMVGGGGIGGGVGGGGGGGGGTILFV
GDLHWWTTDAELEAELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPTAATACKEGMNGL
VFNGRPCVVAFASPYSVKRMGEAQVNRNQQTTQSTQVRRGPNNDAGGKPGGNNIATGGNY
QGGDNNRGYGRGNWGRGNAQGGMGNRGPGGPMRNRGGGMGGRGIMGNGGNGFGQGIGAAP
PLLHPQSMMGQGFDPAFGGPMGRMGSYGGFPGAPTPPFSGILSSFPPVGGVGLPGVAPHV
NPAFFGRGMPMNGMGMMPTSGIDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASD
HQYGEVSHDRVGWPNAMKEKDRGSERDWSGSSDRRYRDDRDPGYDRDIPKEKETGIDHDW
SEKRHRDDRDIGRERSRERDRDRERSRERDRDRERDRDRERDRDRYREDKERYADHHRYR
DREGDHEDEWERGRSSRTYSKSRLSQEEEHRSRSKDADYGKRRRLTSE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggacgagggcgagggagggtacggagagggtacagatcagatggatcagttccatcgg
aacgaggcgatctcggcggtcgccgacgaggggttcctcggcgaggaggacgacgactat
gaggatttgtacaacgacgtgaatgtcggggaggggtttttgcagtctctgaggaagggt
gaggaagtagggtttaagaatgaggaggagaagaagaaggtagagttaccgtcaccgagg
gtggcaccggaggtgcacaatgtttcgatccctggtgtcggtgagggtagtggtaatggt
agtggtggtggggctagggtttctgggtatcagattaatcaagggtttagagggaatgag
gtgaaagggacggtcggatcgggtggtggtgggattagggttgagttagggcaaagtggg
atgatgagtaagagtcaggtgaatgaggtagaggagcagagtgggaataataatagtagt
ttaatcattcaagggattggtcgagggcagcaatcacatggtggtgtagggaatgtaggg
aacgagggtttggtgaggcaaagtggtggtggtggagtaggaggaggagggagtgtgaat
gggattggtggaaatggggttgggaatagtggtggtgttggtgttatggtgggaggaggt
ggtattggtggtggtgttggaggaggtggtggtggtggtggggggacaatattgtttgtg
ggtgatttgcattggtggacgactgatgcggaactggaagcggagttgtgcaagtatgga
ccagtgaaggaggtgaagttttttgatgagaaagcgagtgggaagtcgaaaggatattgc
caggtcgagttttatgaccccactgctgccacggcgtgtaaggagggaatgaatggactt
gtctttaatgggagaccatgtgttgttgcgtttgcatcgccttatagtgttaagagaatg
ggagaggctcaggtgaataggaatcaacagacgacacagtctacgcaagtgaggaggggg
cctaataatgatgccgggggtaagcctggtgggaacaacattgcaacaggtgggaattat
cagggtggggataataatagaggttatgggcgagggaattgggggagaggtaatgcacag
gggggaatggggaatagagggccgggtggaccgatgaggaataggggtggtggaatggga
gggagagggataatgggaaatggtgggaacgggtttggtcagggtattggtgcagccccg
ccgttgttacatcctcagtcaatgatgggtcagggttttgatccagcatttggtgggcct
atggggagaatgggtagctatggaggctttcctggtgctccaacgcctccattctcaggc
attttgtcttcattcccccctgtgggaggtgttggtttgcctggagttgcccctcatgtg
aatccagcattctttggaagagggatgcccatgaatggaatgggaatgatgcccacgtct
ggtattgatgggcctaacatgggaatgtggtcagatcctagtatgggtggatggggtggt
gaggagcatggtggtggtagagctggggagtctagttatggggaggaagctgcatctgac
catcaatatggtgaggtcagtcatgatagagtgggttggccaaatgccatgaaggaaaaa
gatagaggttcagaaagggactggtctgggtcgtctgatagaaggtatcgggatgatagg
gatccaggttatgatagggatattccaaaagaaaaagaaacgggcattgaccatgactgg
tcagaaaaaaggcatcgtgatgatagagatattggtcgagagcgctctcgggagcgtgat
cgggatagagaacgctcccgggagcgtgatcgtgaccgtgagagggatcgtgatagggag
cgtgaccgtgacaggtacagagaagacaaagagaggtatgctgatcatcataggtacagg
gaccgtgaaggggatcatgaggatgaatgggaaaggggccggtcatctaggacttacagc
aagtcacgtttatcacaagaggaggaacatcgttcaagatcaaaggatgctgattatggg
aagaggcgaaggctgacttccgagtaa
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