Alnus glutinosa (common alder): 133874883
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Entry
133874883 CDS
T10577
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aglu
Alnus glutinosa (common alder)
Pathway
aglu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133874883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133874883
03009 Ribosome biogenesis [BR:
aglu03009
]
133874883
04131 Membrane trafficking [BR:
aglu04131
]
133874883
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aglu04147
]
133874883
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133874883
Ribosome biogenesis [BR:
aglu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
133874883
Membrane trafficking [BR:
aglu04131
]
SNARE
SNARE associated proteins
Others
133874883
Autophagy
Aggrephagy
Other aggrephagy associated proteins
133874883
Exosome [BR:
aglu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133874883
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_5
AAA_33
AAA_16
AAA_14
AAA_2
AAA_22
RNA_helicase
NPHP3_N
Mg_chelatase
nSTAND3
AAA_28
TIP49
AAA_18
AAA_17
Parvo_NS1
ATPase_2
NB-ARC
ResIII
Viral_helicase1
Vps4_C
IstB_IS21
ABC_tran
TsaE
AAA_7
AAA_lid_PRS2_C
NACHT
nSTAND_NTPase5
Zeta_toxin
Molydop_binding
Zot
Motif
Other DBs
NCBI-GeneID:
133874883
NCBI-ProteinID:
XP_062168755
LinkDB
All DBs
Position
8:6198151..6206034
Genome browser
AA seq
838 aa
AA seq
DB search
MFTTCRRQRTERLRERIQTMADPRSSAPDQRQASFSSDQKANKRDYSTASLERKKSPNRL
IVDEAIDDDNSVVFMHPNTMEKLQLRRGDAILLKGKKRKDTVCIALTDELCEEPKIRMHK
VVRANLRVRLGDVISVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPV
RKGDLFLVRDGMRSIEFKVIETDPGEYCVVAPDTEIFCQGEPINREEERLNEVGYDDFGG
VRKQMAQIRELVELPLRHPQLFKAIGVKPPKGILLYGPPGSGKTLIARAVANQTGAVFFL
INGPEIMLKLAGESESYFREVFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERHRVSQL
LTVMDGLGSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNM
KLADDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVT
NEHFKTALGSSNPSALRETVVEVPNVSWKDIDIGGFENVKRELLETVQYPVEHPEKFEKF
GMSPSKGILFYGPPGCGKTLLAKAIANECQANFTSVKGPEQLTMWFGESEANVREIFDKA
RQSAPCVLFFDELYSIATQRGSSVGDAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRP
DIIDSALLRPGRLDQLICIPLPDEASRLQIFKACLRKSPISKDVDIAALARYTHGFSGAD
ITEICQRACKYAIREDIEKDIERERKKRDNPEAMEEDDDIDEAPEIKAAHFEESMKYARR
SVNDADIWKYQLFAQKLQQSRGFGTEFRFKDRTESAAAEASDPFSSATAAGEDDDLYN
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtttactacttgtcgaagacaaagaacagagagactgagagagagaatccaaaccatg
gcggatccaagatcatctgccccagatcaaagacaggcttcgttctcctcggaccagaaa
gcaaataagagggattattccactgcaagtttggaacgcaagaagtctcctaaccgcctt
attgttgatgaagctatagatgatgataattctgtggttttcatgcacccaaacacaatg
gaaaagcttcaactacgtcgaggggacgctattttactcaagggaaagaagcgcaaagat
actgtctgcattgctcttactgatgaactatgtgaagaaccgaaaatcagaatgcacaaa
gttgttcgagcaaatctcagagttcgccttggagatgtcatatccgtccatcagtgccct
gatgtgaagtatggaaaacgggttcacatccttccgattgatgatacaattgagggtgtc
actggcaacctttttgatgcatatttgaagccatatttcttggaagcttatcggcctgtg
aggaagggtgaccttttcctagtcagggatggaatgagaagtattgaattcaaggtcata
gagactgaccctggtgagtattgtgttgttgcgccagacactgaaatcttctgtcaggga
gaacctatcaaccgtgaggaggagagattgaatgaagtgggatatgatgattttggtggt
gttaggaagcaaatggctcagatccgtgagctagtagaacttcctcttcggcacccacag
ctcttcaaagcaattggtgtgaagcccccaaaaggaatcctgctttatggaccacctggg
tctggaaaaactctgatcgcaagagctgtagctaatcagacaggtgcagtcttctttttg
attaatggacctgaaataatgttgaagctagctggtgagtctgaaagctacttcagagag
gtatttgaagaagccgaaaagaatgccccatctatcatatttattgacgaaatagattcc
atagctccaaagagggaaaagacacatggtgaagtggagaggcatagagtatcccaactt
ttgactgtaatggatggccttgggtccagagcacatgtgattgtgatgggagctaccaat
agacccaatagcattgaccctgcactgaggagatttgggagattcgatcgagagattgac
attggcgtaccagatgaggtcggaagattggaagttcttagaatccatacaaagaatatg
aaacttgctgatgatgttgatcttgaaagggtttcaaaagatacccatggttatgtcggt
gcagatcttgctgctctttgcacagaggctgctcttcaatgtatccgggagaaaatggat
gtaattgacttggaggatgaaactattgatgctgaggtgttgaattcgatggctgtgact
aatgaacacttcaaaactgctttggggtcttcaaatccatcggccttgcgtgaaacagtt
gtggaggttcctaatgtttcatggaaagatattgatattggtgggttcgaaaatgttaaa
agagaacttctggagactgtccaatacccagtggaacatcctgagaagtttgagaaattt
ggcatgtcaccttctaaaggtattctcttttatgggcctcctggctgcggtaaaaccctt
cttgcaaaggcaattgccaatgaatgccaggcaaatttcacaagtgtcaaaggacctgag
cagctgacaatgtggtttggagaaagtgaggcaaatgtccgcgagatatttgacaaggcc
aggcagtcggcaccatgcgttctgttctttgatgaactatactcaattgcaactcagcgt
ggtagctctgttggtgatgctggtggtgctgcagatagagtattgaaccaacttctgaca
gaaatggatggcatgacagcgaagaaaacagtctttataattggggcaacaaataggcca
gatataattgattcagctttgctcaggcctggacgtctggaccagttgatttgcatcccg
ctgccagatgaggcttcccgcctccagatttttaaagcatgtttacggaagtcacctatc
tctaaggatgttgacattgctgctcttgcacggtatactcatggttttagtggtgcagat
atcactgaaatttgtcagcgcgcctgcaaatatgccattagagaggatatcgaaaaggat
attgagagggagaggaagaaaagagacaaccctgaagctatggaagaagatgacgacatt
gatgaagctcccgagataaaggcagcacactttgaagagtcgatgaaatacgcccgccga
agtgttaatgatgcggacatctggaaataccagctcttcgctcagaaattgcagcaatcc
cgtgggtttggaacagagtttcggtttaaagacagaaccgagagtgctgcagcagaagct
tcagacccgttttcttctgccactgccgccggagaagatgatgatctctacaactga
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