Alnus glutinosa (common alder): 133875141
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Entry
133875141 CDS
T10577
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133875141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133875141
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133875141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
133875141
NCBI-ProteinID:
XP_062169139
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Position
8:complement(28487961..28491843)
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AA seq
478 aa
AA seq
DB search
MMESDLGKLFIGGISWDTDEERLKDYFRKYGEVVEAVIMRDRATGRARGFGFVVFADPAV
AERVIMDKHMIDGRTVEAKKAVPKDDQNILNRNTGSFHSSPGPGRTKKIFVGGLASTVTE
SDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKQFHELNGKMVEVK
RAVPKELSPGPSRSPLIGYNYGWSRANSFLNNYVQGYNMSPVGGYGVRMDGRFNQVPSGR
GGFSPFSTTGYGMGLNLEPGLSPSYGGNSNFGNSLGYARMLSPYYSSNSNRYNTPIGYSG
GNGRSDSLLSSTTRNVWGNGGLNSAANASSPGAYLNSGSGGFGVFGNSSANWGPSPASTQ
GGGSPPGYTSGNIGYGSGESNFGLGGGGYGRNSGTGVAQTSSFAASTGGYEGSYGDFYRS
GSVYGDSTWRSATPELEGSGSFGYGLGNISSDVTAQSSEGYIGSYNVTSRQSNRGIAT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatggaatcagatcttggaaagctcttcattggtgggatttcttgggacacagatgaa
gaacgtcttaaagattattttaggaaatatggggaagtggtggaggcagtgatcatgaga
gatcgtgccaccggtcgtgctcgtggctttggttttgttgtctttgcggatcctgctgtt
gcagaaagagtcatcatggataagcacatgattgatggccgcacagttgaagcaaagaag
gctgttcctaaggatgatcagaacattttaaatagaaacactggtagctttcatagttct
ccaggtcctggacgtacaaaaaagatttttgttggaggtttagcgtctacagtcacagag
agcgactttaagaaatactttgatcagtttggtacaattaccgatgttgtagtgatgtat
gatcacaacacccagagaccaagaggttttggcttcatcacctatgattctgaggatgca
gtagatagagtgctgcataaacagtttcatgaactgaatggtaaaatggttgaggtgaag
agggcagtccccaaagagctatccccagggcccagccgaagccctcttataggatataac
tatggttggagtagggccaatagcttccttaacaattatgtccagggttataatatgagc
ccggttggaggttatggagtcaggatggatggtaggtttaaccaagttcctagtggtcga
ggtgggttttccccatttagtacaactggttatggaatgggtttgaatttggagccaggg
cttagcccaagctatggtggcaattccaactttggcaatagtcttggatatgcacggatg
ctgagtccttattacagtagtaattcaaacaggtacaatactcctattgggtatagtggg
ggtaatggaagaagtgattctcttttaagctcaacgacaaggaatgtctggggaaatggt
ggtcttaacagtgctgcaaacgcttccagccctggtgcgtacttgaactctggaagtggg
ggtttcggagtttttggaaatagcagtgcaaattggggcccttctcctgcttcaactcaa
ggtggaggaagtcctcccggttatactagtgggaatattggttatggcagtggagagagc
aactttgggttgggagggggagggtatggaagaaacagtggcacaggtgtagcccaaaca
tcatcatttgctgcatcaactggaggttatgaggggtcctatggtgacttctatcggagt
ggttccgtttatggtgattcaacttggcggtctgctacccccgagctagagggttctgga
tcgtttggctatgggcttggcaatatatcttcagatgtcacggcccaaagttctgagggt
tatattggaagttacaatgttacaagtagacaatcaaatagaggaattgctacgtag
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