KEGG   Alnus glutinosa (common alder): 133875624
Entry
133875624         CDS       T10577                                 
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1
  KO
K03141  transcription initiation factor TFIIH subunit 1
Organism
aglu  Alnus glutinosa (common alder)
Pathway
aglu03022  Basal transcription factors
aglu03420  Nucleotide excision repair
Brite
Transcription machinery [BR:aglu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     133875624
DNA repair and recombination proteins [BR:aglu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     133875624
SSDB
Other DBs
NCBI-GeneID: 133875624
NCBI-ProteinID: XP_062169798
LinkDB
Position
8:29664465..29674892
AA seq 603 aa
MATGHVIKRAKYKTSAKGPGTPGVLKMTESKVVFKPNDPTSTAKTDVEFRSIKGHKNTKE
GSNNPPLLNLALDQGGSYIFEFETFSDLHVCREFVANTLAKSGEAAKVKSREAVIATSDK
TAVTYSDEQLSTAEMELRIKLLRENSELQKLHKQFVLGNILTESEFWATRKRLLDGDSGR
KSKQLVGFKSSMILDTRPQTDGRTNKVTFNLTPEIKYQIFALKPAVQQAFLNLVPSKMTE
RDFWTKYFRAEYLHSRKNAVAAAAEAAEDEELAIFLKDDDILASEARRKIQRVDPTLDME
ADQGDDYMHLPDHGIFRDGSKDITESQHEQYRRTFLQDLNRQGEVVLEGRTIDVELDDPM
SVAEALARSRRESDGNTKEERIDRISRMTEMEDLQAPYDHPFAPLCIKDPRDYFDSQQVN
ALKTSDDARAGAEQLRCSLSTEEAYGFLRGSISEIKATGLCAPIVRPEVALTVLNGLTQN
ISSTKYQLGKNVQESILDRMPITTKEELLHHWISIQELLRHFWSSYPITTSYLYAKVSRL
KDAMSKIYPQLEELKESVPSDLRHQVFLLVRPMHQALDAAFQHYESDLQKRSAKSGEKPN
GYI
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcgaccgggcatgtgatcaagcgggccaagtacaagacctcggccaaaggccctggg
actcctggtgtattgaagatgactgagagcaaggttgtgttcaagccgaatgatcccact
tcaaccgcaaagactgatgtagagtttagatcaataaaaggtcataaaaacactaaggag
ggatctaacaatccaccattgcttaatctcgcccttgatcagggcggtagttacattttt
gagttcgaaactttctcagatcttcatgtttgccgagagtttgttgcaaatactcttgca
aaatcgggagaggctgcgaaagtgaagtccagagaggctgtgatagccacttctgataaa
actgcggttacttattctgatgaacaactcagtacagcagaaatggagcttcgaataaag
ctattgcgagagaatagtgagttgcagaaacttcataagcaatttgtgcttggtaatatc
ttgacagaatctgagttctgggctacaaggaagaggttgctggatggagacagtggccga
aagtcgaagcaactggttggttttaaaagttcaatgattctagatacaagaccccagact
gatggccggacaaacaaggttacattcaatttgacacccgagatcaaatatcagattttt
gctctgaaaccagctgttcaacaggcatttcttaatcttgttcctagtaagatgacagaa
agggacttctggacaaaatattttagagctgaatatctccatagtagaaaaaatgctgtt
gcagccgcagcagaggctgctgaagacgaggagctagccatttttctgaaggatgatgac
atattggcaagtgaagctcggcgaaagattcaacgggttgatccaactctagacatggaa
gccgaccaaggggatgattacatgcatctcccagatcacgggatttttcgtgatggtagc
aaggatataactgaatcacagcatgagcaatacaggagaactttcttacaagaccttaac
cggcaaggcgaggttgttcttgaaggaagaactatagatgtagagttggacgatccaatg
tccgtagcagaagcacttgcacgttcaagacgggaatctgatgggaataccaaggaggag
agaattgataggatttctcggatgactgagatggaggaccttcaggcaccttacgatcat
ccttttgctccactttgtatcaaggatcctcgtgattactttgattctcaacaagttaat
gcacttaaaacttctgatgacgcacgagctggagcagaacaattgagatgtagcctgagt
actgaggaagcatatggctttttgaggggttcaatatctgagataaaggctacgggattg
tgtgctccaattgtcagacccgaggtcgctcttacggtccttaatggattgacccagaat
atctcaagtaccaaatatcagctgggaaagaatgttcaagagagtatactggacaggatg
cctatcacaactaaggaggaattgctacatcattggatatcaattcaagaattattaagg
cacttttggtcctcatatccaatcactacatcgtacctttatgccaaggtgagcagattg
aaggatgccatgtcaaaaatatatccacagctggaggaattaaaggagtccgtgccctca
gacctccgccaccaggttttcctccttgttcgtcctatgcatcaggctctagatgctgct
tttcaacattacgaatcagatttgcagaagagatcagcaaagagtggggagaaaccaaac
ggatacatctag

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