Alnus glutinosa (common alder): 133877196
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Entry
133877196 CDS
T10577
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aglu Alnus glutinosa (common alder)
Brite
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133877196
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133877196
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133877196
microRNA pathway
RISC loading complex
133877196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133877196
NCBI-ProteinID:
XP_062171432
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Position
9:complement(11913619..11922499)
Genome browser
AA seq
922 aa
AA seq
DB search
MDSFEQDGNGTTDGGSTLDALPPPPPVIPPDVVPLRAEPEPLAEPVKKKVLRIPIARRGP
GSKGQKIPLVTNHFKVSVTNVEGHFFHYSVSVTYEDGRPVEGKGVGRKVIDRVKETYDTE
LAGKDFAYDGEKSLFTVGSLPRNKLEFTVVLEDVQSNRNNGNRSPDGHGSPNESDRKRLR
RPYNSKTFKVEISFAAKIPMNAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQ
SFFHNDPKNFAEVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLISNQN
VRDPFQLDWSKAKRVLKNLRVKASPSNLEFKITGLSEKPCKEQTFTLKQRNGNDVDGEGQ
IEVTVYDYFVNHRGIELRYSGDLPCINVGKPKRPTYLPLELCSLVSLQRYTKSLSTPQRA
SLVEKSRQKPHERMKVLSDALKTNNYDSEPMLKSSGISISSSFTQVEGRVLPAPRLKVGN
GEDFFPRNGRWNFNNKKLVQPAKIERWAVVNFSARCDIQGLIRDLTKCGELKGILIEPPF
DVFQENPQTRRAPPMVRVEKMFEDIQSKLPGAPQFLLCLLPERKNSDLYGPWKRKNLAEY
GIVTQCMAPTRVNDQYLTNLLLKINAKLGGLNSLLAVEHSPSIPIVSKAPTIIIGMDVSH
GSPGQSDIPSIAAVVSSRQWPLISKYRASVRTQSPKVEMIDSIFKRVSETEDEGIFRELL
LDFYTSSGKRKPDQIIVFRDGVSESQFNQVLNIELDQMIEACKFLDEKWCPKFVVIVAQK
NHHTKFFQPGSPDNVPPGTIIDNKVCHPRNNDFYLCAHAGMIGTTRPTHYHVLFDEVGFS
ADDLQELVHSLSYVYQRSTTAVSVVAPICYAHLAATQIGQFVKFEDTSETSSSHGGLTSA
GAVPVPQLPRLEEKVCNSMFFC
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggattcatttgagcaagacggtaacggcacaacagatggaggcagcacactggatgca
ttgccacctcctccccctgttatcccaccagatgttgttcctctgcgtgcagaaccagaa
ccccttgccgaaccagttaagaaaaaggttctgcgaattcctatagcgaggcgtggtcct
ggaagcaaagggcaaaagatacctctggttacaaatcattttaaagtttcggttacaaac
gttgagggccatttcttccattatagtgtttctgtgacttatgaagatgggcgccctgtc
gaaggtaaaggtgttggaagaaaggtgattgatagggtgaaggagacttatgatactgag
ttagctgggaaggactttgcttatgatggggagaagagtttgttcactgttggatcactt
ccccgcaataaacttgagtttactgttgtgcttgaggatgtccaatccaacagaaacaat
ggtaatcgtagccctgatggccatggaagtccaaatgagagtgaccgcaagagattgcgg
cgtccgtataactccaagacatttaaagtggagattagctttgctgcaaaaattcccatg
aatgccattgcaaatgctctacggggtcaggagtcagagaactcccaagaagccctaaga
gtgctggatattatattgaggcagcatgctgctaagcagggctgcctccttgttcgccaa
tctttttttcacaatgatccaaaaaattttgcagaggtcggtggtggtgttcttggctgc
agaggatttcattcaagttttagaaccacccagggaggcttatctctgaatattgatgta
tcaactaccatgatcatacagcctgggccagtggtggattttttaatttccaatcagaat
gtgagggatccatttcaacttgattggtcaaaggctaagcgagtcctcaaaaatcttagg
gttaaagctagtccctccaatcttgagttcaagataactggtttgagtgagaaaccatgc
aaagagcagacctttacgctaaagcagagaaatggaaacgatgtggatggtgaaggtcag
atagaagtgactgtttatgattattttgttaatcatcgtggtatagaattgcgttattct
ggagatcttccatgtatcaatgtcgggaagccaaaacgcccgacttatttacctcttgag
ctttgttccttggtgtccttgcaacgatatacaaaatctctatccactcctcaaagagct
tcactagtggaaaaatcaagacaaaagccacatgagaggatgaaggttttgtctgatgct
ttgaaaaccaacaattatgattctgaaccgatgctaaaatcaagtggcatttcaatcagt
agcagcttcactcaagtggaaggccgtgttctgccagcacctaggttgaaagtgggaaat
ggggaggacttttttcctaggaatggtagatggaactttaacaataagaaattggtgcag
ccagcaaagatagaacggtgggctgttgtcaacttctcagcgcgttgcgatatacaagga
ctaatacgagatttgactaaatgtggagagttgaagggaattcttattgagcctccattc
gatgtgtttcaagagaatcctcagactagacgtgctcctcctatggttagagtggagaag
atgtttgaggatattcagtcaaagcttcctggtgctccacagtttcttctttgcttgctt
cctgagaggaaaaactctgatctttatggtccatggaagcgaaagaatcttgccgagtat
ggaatagtaactcaatgcatggctcctacaagggttaatgaccaatatcttactaatctt
ctcttgaagataaatgcaaagctgggcggtttgaattcgttattggcagttgaacactct
ccctctattcctatagtttccaaggctcccaccatcataattgggatggatgtgtcacat
ggctctcctggacagtctgacataccatcaattgctgcggtggtcagctcaaggcagtgg
ccgttgatttctaaatatagggcatctgttcggacacagtctccaaaggttgaaatgata
gattcaatatttaagcgcgtgtctgaaactgaagatgaaggcatatttagggagcttttg
cttgacttctatacgagttcagggaaaaggaaacctgatcaaatcattgtattcagggat
ggagtcagcgaatcacaattcaatcaagttttgaacattgaattggatcagatgatagag
gcatgcaaatttcttgatgagaagtggtgccccaagtttgtggtaattgttgcacagaaa
aaccaccatacaaaattcttccagcctggttctcctgataatgttccacctggaacaatt
atagacaacaaagtttgtcatccacgaaacaacgatttttatctttgtgctcatgctgga
atgattgggaccacaaggccaacacattaccatgttctatttgacgaggttggcttttct
gcagatgatttacaggaacttgtgcattcactgtcttatgtgtaccagagaagcacaact
gccgtttctgtagttgccccaatatgctacgcccacttggcagccacccaaatcggacag
tttgtgaaatttgaagacacatctgagacatcctcaagccatggaggtttgacatctgct
ggagctgtccctgttccgcaactgcccagattagaggagaaagtgtgcaactccatgttt
ttctgttga
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