Alnus glutinosa (common alder): 133877213
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Entry
133877213 CDS
T10577
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133877213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aglu04121
]
133877213
Enzymes [BR:
aglu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133877213
Ubiquitin system [BR:
aglu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133877213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
Zn_ribbon_6
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
133877213
NCBI-ProteinID:
XP_062171450
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All DBs
Position
9:complement(1134105..1137773)
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AA seq
308 aa
AA seq
DB search
MYAGGGFCHEVTESCTASADLDPASSSAELRSSAYRKAASGLGGNPGRSSNNDVHELLEC
PVCMNLMYPPIYQCPNGHTLCSNCKARVHNFCPTCRHELGNIRCLALEKVAESLELPCRY
QVLGCHDIFPYYSKLKHEKHCKYRPYNCPYAGADCSVTGDVPLLVMHLKKDHKVDMQDGC
TFSHRYVKSNPQEVGNAIWMLTVFNCFGRQFCLHFEAFHLETAPVYMAFLRFMGDEDEAK
QFSYSLEVGGNGRKLTWQGIPRSIRDSHKKVRDSQDGLIIQRNLALFFSGSNRQELKLKV
AGRIWKEQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctggaggaggcttctgccatgaagtgactgagtcttgcactgcatccgcggat
ttggatccggcaagttccagtgccgagttaaggagttctgcttacagaaaagctgcctct
ggtttaggtggaaatcctggaaggtcatcaaacaatgatgtgcatgagctacttgagtgc
cctgtttgcatgaatctaatgtaccctccaatataccagtgtccaaatggccacactcta
tgttcaaactgcaaggctagagtgcacaacttttgccccacatgccgccatgagcttgga
aatataaggtgcttggctttagagaaagtagcagagtcactagagctcccatgcaggtac
caagtattgggttgtcacgatatattcccatattacagcaagctcaaacatgagaaacac
tgtaaatatcgtccctacaactgcccttatgctggagctgattgttcggtcactggtgat
gtcccactccttgtcatgcatctcaagaaggatcacaaggttgatatgcaagatggatgt
actttcagccacagatatgtgaaatccaatcctcaagaagttggaaatgctatatggatg
ttaactgtcttcaactgctttggccgtcagttctgcttgcactttgaggcattccatctt
gaaacggcgcccgtttacatggccttcctgcgattcatgggtgatgaagatgaggccaag
caatttagttacagtctggaagttggcggaaatggcaggaaacttacatggcaaggtata
ccaaggagtatcagggatagccataaaaaggtaagggatagtcaagatggattaattatt
cagagaaatctggcactcttcttttctggcagcaataggcaggagttgaagctgaaagtt
gctggtcgtatatggaaagagcaatga
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integrated database retrieval system
