Alnus glutinosa (common alder): 133877293
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Entry
133877293 CDS
T10577
Name
(RefSeq) serrate RNA effector molecule isoform X1
KO
K27103
serrate RNA effector molecule
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133877293
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
133877293
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Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
133877293
NCBI-ProteinID:
XP_062171526
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Position
9:complement(11645301..11679583)
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AA seq
746 aa
AA seq
DB search
MAEVMNMPVESLDGRNERKEKSTEDLPPPPPPPPPPQQQRRRDRDSRERRDDRDLDRPPN
RRADYYDRNRSPPPPPIREREYKRRSSLSPPPQPYGDRRHSPPRRSPPPPYKRSRRDDGG
YEGRRRSPREGFGPGNRRLGYDYASGYDREMRGRPGYADERPNGRYMGRSPGGYQGGPSS
ADWDPIRGGYSDASNVVNTEREGLMSYKQFIQELEDDVLPAEAEHRYQEYKSEYISTQKR
AFFDAHKDEDWLKDKYHPTNLLTVIERRNEVARKAAKDFLLDLKGGTLDLGPGVNASSSN
KSGQTSDPNSDDEVDLGGKRRWHGRGLAKETDLSSGPKAHSVSSEPRRIQVDIEQAQALV
RKLDIEKGIEENILCGSDNDIVNREKSHGGSTGPVIIIRCLTSVKGLEGIELLDTLISYL
WRIHSLDYYGMVETSEAKGFRHVRVEGKSSDMTIDGAEWEKKLDSRWQERLRGQDPLEVM
TAKEKIDTAAVEVLDPNVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPDLIM
EVTSKVREELYFRNYMNDADAPGGTPVMQQSTKKDKPLRHRLGSDNRLKDERGNHRERDN
RANGSEKYDRSENPQSSDFQSNNDGSDGGNLDEPMYETFGGQGMRVTPFPSDIPPPPVLM
PVPGAGPLGPFVPAPPEVAMRMLREQGGPPPFEGGGRNGRPGPQLTGPGPILSFSPAFRQ
DPRRLRSYQDLDAPEDEVTVLDYRSL
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggtgatgaacatgccggtcgagtcgctggacggccgcaacgaaagaaaggag
aaatccaccgaggacctgccaccgccgccaccaccgccgccgccgccgcagcagcagaga
cgacgggaccgagactcgagagagagaagagacgaccgagacctcgaccggcccccgaat
cgccgagccgactactatgaccgcaaccggtctccgccacccccgccgataagggagagg
gagtacaagcggcggagcagcctgagccctccaccgcagccttatggggatcggaggcac
tcgccaccccgacggtcgccgccgcctccgtataagcgttcgaggagggatgatggaggg
tatgaggggaggagaaggagccctagggaaggctttggacccggcaatagaaggttgggt
tatgattatgctagcggatatgatcgtgagatgaggggcaggcctgggtatgctgacgaa
aggcctaatggccggtacatgggtcgatcacctggtggctatcaaggtggtccttcgagt
gcagattgggatccaatccgtggtggttatagtgatgcttccaatgtagtgaatactgaa
agggagggcttgatgtcatacaagcaattcatacaggagcttgaagacgatgtattacca
gctgaagctgagcacagatatcaagaatacaagtcggagtatatttcaactcaaaaacga
gctttttttgatgctcataaagatgaggattggttgaaggacaaatatcacccaacgaat
ctacttactgtaatagaaaggaggaatgaagttgcaagaaaggctgcaaaggattttttg
cttgatctgaaaggtggaacattggacttaggccctggcgtcaatgcttcatcgtcaaat
aaatcaggacagactagtgatccaaattctgatgatgaagtagacctaggtggtaaaaga
agatggcatggtagggggttagctaaagaaactgatctttcatctggtcctaaggcccac
tcagtcagttctgaacccagacgaatccaagttgacattgaacaagcgcaggctcttgta
cgtaaacttgatattgaaaaagggatcgaggaaaatattttatgtggttctgataatgac
atagtgaatagagagaaatctcatggtggctccactggtccagtaattattatacgttgt
ttgacctctgtcaagggcctggagggcattgagctcctagatacacttatatcttatctc
tggcgaatccatagcttagattattatggaatggttgagacaagtgaagctaagggtttc
cggcatgtgagagtggaggggaagagttctgacatgactattgatggggctgagtgggaa
aagaaacttgactctcgttggcaagaaaggctgaggggtcaagaccctttggaagtaatg
actgctaaggaaaagatagacactgctgctgttgaagttttagatcctaatgttcggaag
attagggatgaaaaatatgggtggaagtatggttgtggagccaagggttgcacaaagctg
tttcatgctgctgagtttgtgtacaagcatcttaaactgaaacaccctgaccttataatg
gaagtgacttccaaagtgcgtgaagagctgtattttcgaaattatatgaatgatgcagat
gcacctggtggaacacctgttatgcagcaatccacgaagaaggacaagccactgagacat
aggctaggttcagataatcgattgaaagatgaacgtggcaaccatagagaacgtgataat
cgagctaatggtagtgaaaaatatgataggtccgaaaacccacagtcaagtgacttccaa
tccaacaatgatggatcagatggaggaaatcttgatgaaccaatgtatgaaacttttggc
ggacagggaatgcgtgttactccttttccctctgatatcccccctccaccagtattgatg
cctgttcctggtgctggtccattagggccttttgttcctgctccacctgaagtggcaatg
cgaatgttgcgtgagcagggtggtcctcccccttttgaaggtggtggtagaaatgggcgg
cctgggccgcaattaactgggccaggccctattctttctttttctccggcttttaggcaa
gatccacgacgtctacgcagttatcaagacctagatgcaccagaggatgaggtcactgtg
ttagactacaggagcttgtag
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