Alnus glutinosa (common alder): 133877432
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Entry
133877432 CDS
T10577
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aglu03036
]
133877432
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aglu00535
]
133877432
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
133877432
Meiosis-specific proteins
Cohesin complex and associated proteins
133877432
Proteoglycans [BR:
aglu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
133877432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
Myosin_tail_1
AAA_23
Phage_lysis
Microp_apicomplexa_7
Cytochrom_C_2
Motif
Other DBs
NCBI-GeneID:
133877432
NCBI-ProteinID:
XP_062171710
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Position
9:10863068..10930526
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AA seq
1204 aa
AA seq
DB search
MYIKQVVIEGFKSYREQIATEPFSPKINCVVGANGSGKTNFFHAIRFVLSDLFHNLRSED
RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVCLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELHDARQKLV
EVEEARNKVSETSAKMYNSVLDAHEKSKDLEETLKDLTKEVQGLIKEKEAVEKRRTEAIK
KHTELELDVKDLQEKIYGNNRAKEDATRQLGNLQKEIQNSMDELDEIHSSYENQVRKEKK
TTKKIMEREKQLSILYQKQGRATQFPSKAARDKWLQKEIDDLERVLSTNLVQEEKLQDEI
YRLNAELKERDVYIERRRTEIASLESHISQSREGFSHHKAQRDKLQNERKYLWGKESKLS
AEIDKLRTEVEKAEKSLDNATPGDVRRGLKTVKYICKEYDVRGVFGPIIELLDCDERFFT
AVEVTAGNSLFHVVVENDEISTKIIKHLNSLKGGRVTFIPLNRVRAPHVSYPHNSDVVPL
LKKLKFSPNYTAAFAQVFARTVICRDLDVATKVARTDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLKFMNMIMQNKTSLNSKEKELEDVRNMLQEIDQKITELVTEQQKIDAKQVHDKS
ELEQLKQDITNANKQTQLISKALENKEKSLADVRTQIDQLRASMAMKQAEMGTELVDHLT
PEERVLLSRLNPEIAKLKEKLVTRKANRMETETRKAEVETNLTTNLKRRKQELEAIILSA
ETETSLGEGDLKRQELNDAKLLVDDATHQLKRVTERIDEQTKQLRMKKDEQNKLKTLEDE
YERTLQDEAKELEQLLSKRNVFLAKQEEYSKKIRELGPLSSDAFEMYKRRSIKELHKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIRELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDNGDDDLDEDGPQEADLEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADVANTQFITTTFRQELVKVADKIYGVTHKNRVSRVNVVSKEEALDFIDQDQS
HNTD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggttgtaattgaagggtttaagagctacagagagcaaatcgctact
gagcctttcagtccgaaaattaactgtgttgttggtgccaatggatctggaaaaacaaac
tttttccatgcgatacgatttgtattaagcgatctcttccataacctgcggagtgaagat
aggcatgcactgctccatgaaggtgcagggcaccaagttttatctgcgttcgtggagatt
gtgtttgataattctgacaatcgcatcccggttgataaggaggaagtgtgcttgcgtcga
acaattggtttgaagaaggatgagtatttcttagatggaaagcacatcacgaaaacagaa
gttatgaatttattggaaagtgctgggttctcacgctcaaatccttactatgttgtgcag
caaggaaagatagcatcattgacattgatgaaagactccgagcggctggatttgctcaag
gaaattggtggtactcgagtttatgaggagagacgacgtgaaagtttgaaaattatgcaa
gaaacgggaaataagagaaaacaaataattcaagttgttcaatacttggatgagagatta
aaggaactggatgaagagaaagaggaactgagaaaataccagcagcttgacaagcagagg
aaatctctagaatatactatttatgataaggaacttcatgatgctcggcagaaactggtg
gaggttgaagaggcacgaaacaaagtttctgaaacatcagcgaagatgtataacagtgtg
ctggatgcccatgaaaagtctaaggacttggaggagacattgaaagatctgacaaaagaa
gttcaaggtttaatcaaagagaaagaagcagtagaaaagagacggacagaagcaataaaa
aagcacacagagcttgagcttgatgtcaaagacctacaagagaagatctatggaaataac
cgcgcgaaagaggatgctacaagacagcttgggaacctacagaaagaaattcagaactca
atggatgagcttgacgaaatacattcttcttatgagaatcaagtcagaaaagaaaagaag
accacaaaaaaaataatggagcgtgaaaagcagcttagcattctttatcagaaacaaggt
cgtgctacccagtttccaagtaaagctgctcgtgacaaatggcttcaaaaggaaattgat
gatcttgaacgggtgctttctacaaatttggtgcaggaggaaaaacttcaggatgaaatt
tatcggcttaatgctgagttaaaagagcgggatgtctacattgagagacgtagaactgaa
attgcttctttggaatcccatatctcccagtcacgtgaagggttcagtcatcataaagct
cagagagacaagctgcaaaatgagcggaagtatttatggggcaaagaaagcaaactttct
gctgaaattgataagctgagaacagaagttgagaaggcagaaaagagccttgataatgca
actcctggtgatgtgaggagagggctgaaaactgttaagtacatctgcaaagagtatgat
gttcgtggggtgtttggtccaattattgagttgcttgattgtgatgaaagattttttact
gcagttgaagttactgctggaaatagcttatttcatgtggtggtcgaaaatgatgaaata
tcaacaaagataattaaacacctcaattcattgaaagggggacgagttacttttataccc
ctgaacagggtgagggctccgcatgtatcgtatccacataattctgatgtggtacccctg
ttgaagaaattgaagttctctccaaattatacagcagcatttgcacaggtttttgctagg
acagtgatttgccgtgatctggatgtagccaccaaggttgctcgtactgatggtctggac
tgcataactttggaaggtgatcaagtcagcaagaaaggtggtatgactggtggattttat
gatcacagacgctcgaaattgaagtttatgaatatgattatgcagaataaaacatctctc
aactcgaaggaaaaagagctggaagacgttagaaatatgcttcaagagatagatcagaag
ataacagaacttgttactgagcagcagaaaattgatgccaagcaggttcatgacaagtca
gaattggaacagcttaaacaggacattactaatgctaataagcagacacagttgatttct
aaagctcttgaaaataaggagaagtcacttgcagatgtccggactcagattgatcagctt
agagccagtatggcaatgaaacaggctgaaatgggcacagagctcgttgatcatttaacg
cctgaggaaagagttcttctctcacgattgaaccctgaaattgcaaaacttaaagagaag
cttgttacccgcaaggcaaatcgtatggagactgaaacgagaaaagcagaggttgagact
aatctaacaactaaccttaagaggcggaagcaagagttggaggccataatattgtctgct
gagactgaaacttcgcttggtgaaggcgatttaaagaggcaggaattaaacgatgctaaa
ttattggttgatgatgccacacatcagcttaaaagagttactgagcgtattgatgagcaa
acaaagcaactcaggatgaaaaaagatgaacagaacaaattaaagactttggaggacgag
tatgaaaggacacttcaggatgaagctaaagaattggaacaactattaagtaaaagaaat
gtttttcttgctaaacaagaagagtactcgaagaaaatcagggaattgggtccattgtca
tcagatgctttcgaaatgtacaagcggaggagcatcaaagaattgcacaagatgctgcac
aggtgcaatgaacaactgcaacagttcagccatgtaaacaagaaagcacttgaccagtat
gtaaattttactgagcaacgagaagaactccagaaaaggcaggctgaactggatgcaggt
gatgagaaaattagagaactcatatctgttttagatcagcgtaaggatgaatcgatagaa
cgtacttttaaaggtgttgctaggcacttccgagaagtattttccgaacttgtgcaaggt
gggcatggacatctggttatgatgaagaaaaaggatggagataatggcgatgatgatcta
gatgaagatggacctcaggaagcagatttggagggaagggtcgagaaatacattggtgtg
aaagtgaaggtttcttttactgggcaaggggagacacagtccatgaagcaattgtcaggg
ggtcagaaaactgttgttgccctaacacttatatttgccatacaacgatgtgatcctgct
cccttttatcttttcgatgagatagatgcagcattggatcctcagtacagaactgctgtt
ggaaatatgatacggcgcctggcagacgtggcaaatactcaatttataacaaccacattt
aggcaagagcttgtgaaagttgctgacaagatatatggggtgacacataaaaacagggtg
agccgtgtcaatgttgtctccaaggaagaggcactagattttattgaccaggaccaatcc
cacaatactgattga
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