Alnus glutinosa (common alder): 133877440
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Entry
133877440 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133877440
KO
K13095
splicing factor 1
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133877440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aglu03041
]
133877440
Spliceosome [BR:
aglu03041
]
Complex A
Other components
Complex A specific factors
133877440
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
133877440
NCBI-ProteinID:
XP_062171727
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Position
9:856148..863859
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AA seq
860 aa
AA seq
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MSAKVGTTSAVEPHSTKMSGSSTSSAPTTSSQKVSMFAVKSGFVIPKNKLSGSLIPIIRG
GKKLGSGDAADEESTKLVQRKTKWGPDPTQDASVKKGRALAYQTRLDQITQQLKLGSLEV
RDPQDSPIAAENPDPRSAIPQSNSKNSELLELEKRELIGEILKLNPSYKVPPDYKPLLKE
SIVPIPVKKYPGFNLISLIFGPGGDNQKRLEKETGAKIRVYGTKAETGEKGEIKSSDGNE
IQGAYEELYVQISAETFEKVDAAVSVIELLVTSVSGNLAAVSATSTSVSGDSMDVLTQSQ
FAATSHIVPTTIVNQGVQPPGAGPTQTPLQGQFQFHSPWFPSGQSHSAMHASPGFILSPN
SSAPLLNNPVHSSASPLNPSNMPSLFGPRPIPAAGLNSFLQNPHFLPRPQPPTHVLQHPY
MAQPRPLGHTGPLRNPPMMSLQPSSAQPNFSAPPPFTGSQPPPTRPAPLIMGSLMSSLPQ
PMSGIPPRSIPDRPWTPAGSSSVWSGASASASASASLGLSNMGQMAPQMVPHNRPHPQNP
QPGVASVAPPSNISTASLVSPVIFSSRPSPTQLSGAAVNRPIGAPHFVSNPPPQGGHPAA
FSASLHQTSALVPSPKSSVNLVLGSAPIPLHGSSTQPPLPLQSGVPNSVSGSSPNFTPIK
PPTMSAPSSGDFTFQPHRPQNPVSQTVPMPSRQPAIQSTPQVQPPARQVPSFQLGVPKIT
QPVNQVFQRPQFSNSVGQPQAPVSAAPYAQSPTGAHRLAAFPNASVAPRTPLPQMSPRSF
SPAPQMPSLPGPMVPRPGNPLQLQQNYPARTTRPDIHLAPNQQFGNTFSFASSKPPSNSG
GQQIYDPFSPTSVPTSKADG
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaaggtcggcacgacatctgctgttgagcctcacagcactaagatgtctgga
tcaagtacttcatctgcaccaacaactagtagccaaaaggtctctatgtttgctgtaaaa
tctggatttgttattccaaaaaacaaattgtcaggctcattaattcccatcatccgagga
ggtaaaaaactaggaagcggtgatgcagctgatgaggaaagtaccaaactggtgcagagg
aaaacaaaatggggccctgacccgacacaggatgcttctgtcaaaaagggacgagccttg
gcttatcagacacgattggatcaaattacacaacagctgaaattgggatctttggaggtt
agggatcctcaagactcaccaatagcagccgagaatccagatcccaggtctgcaattcct
caaagtaatagtaagaactcagaattattggaacttgaaaagcgggaacttataggagaa
atattgaaacttaatccaagttacaaggtcccacctgattataaacctttattgaaagag
tcaatagttcctatccctgtcaaaaaatatcctggattcaatcttattagcctaatattt
gggcctggaggtgataatcaaaagcgattagaaaaagaaactggagccaaaatacgagtt
tatggtaccaaagcagagacgggagagaagggagaaattaaatcatctgatggaaatgaa
atccagggtgcttatgaagagttatatgttcaaatatcagctgagacatttgagaaagtt
gatgctgcagtttctgtaattgaactgctagtcacctcagtatcaggaaatttggctgcg
gtttctgcaacctctacttcagtttctggggatagcatggatgttctcactcaaagccaa
tttgcagctacctcccatatagttcctaccaccatagtaaatcagggagtacaaccacct
ggggctggacctacacaaactcctttacaaggtcaatttcaattccacagtccatggttc
ccatcaggccaatctcacagtgcaatgcatgcatctcccggcttcatcctctctccaaat
tcttcagcaccacttctcaacaatccggtccattcatccgcatcacctttgaatccttca
aacatgccttctttgtttgggcctcgaccaattccagcggctggactgaactcatttctc
caaaacccacattttctgcctagaccacagccaccaacacatgttctgcagcatccttac
atggctcaaccacgtcctttaggacatactggcccattgagaaatcctcccatgatgtct
ttacagccttcatcagctcagcctaatttttcagctccacctccatttactggtagccaa
cccccgccaacaaggccagcacctctcatcatggggtcattaatgtcttcacttccgcaa
ccaatgtctggtattccacccagatcaatacctgaccgaccttggacccctgctgggagc
tctagtgtatggtctggagcctctgccagtgctagtgcttcagcatctctaggtctgagc
aacatggggcagatggctccacagatggttccacataataggcctcatcctcaaaatcca
caaccaggtgttgcatccgtggcacctccttcaaacatatcaacagccagtttggtttca
cctgttatcttttcatctaggccatcccctacccagctttcaggtgctgctgttaaccgt
cctattggagctccacattttgtgtcaaatccaccgcctcaaggggggcatccagctgca
ttttcagcttcattacatcaaacatcagcactggtaccttcacctaaatcatctgtaaac
cttgtattgggatctgcaccaattcctttacatggatcatccacacaaccacctttaccc
ctgcaatcaggagtaccaaattctgtttctggaagttcgccaaatttcactcccataaaa
ccaccgacaatgtcagctccaagttccggcgattttacttttcaacctcatcggccacag
aatccagtctctcaaacggtacccatgccaagcaggcaacctgcaattcagagtactcca
caggtgcagcctccagcacgtcaggtaccatctttccagttgggtgtgcccaaaataact
caacctgtcaatcaagtctttcaaaggccacagttcagcaattcagtaggtcagcctcaa
gcccctgtatctgctgctccctatgctcaaagcccaacaggggcacacagacttgcggca
tttccaaatgcaagtgttgcaccgaggactccactcccacaaatgtccccaaggagcttc
agtccagctccccaaatgccgagtttgccgggtcctatggttcctaggccggggaatccg
ctgcaacttcaacaaaattatccagcacgcacaactaggccggacatccacttggctcca
aatcaacaatttggcaacactttctcctttgcttctagtaagccgccttctaattctgga
ggacagcaaatttatgatcctttttcacccacttctgtacctacctcaaaggcagatggg
taa
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