Alnus glutinosa (common alder): 133877450
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Entry
133877450 CDS
T10577
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133877450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133877450
03110 Chaperones and folding catalysts [BR:
aglu03110
]
133877450
03029 Mitochondrial biogenesis [BR:
aglu03029
]
133877450
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aglu04147
]
133877450
Enzymes [BR:
aglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
133877450
Messenger RNA biogenesis [BR:
aglu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
133877450
Chaperones and folding catalysts [BR:
aglu03110
]
Heat shock proteins
HSP60 / Chaperonin
133877450
Mitochondrial biogenesis [BR:
aglu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
133877450
Exosome [BR:
aglu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133877450
Exosomal proteins of other body fluids (saliva and urine)
133877450
Exosomal proteins of breast cancer cells
133877450
Exosomal proteins of colorectal cancer cells
133877450
Exosomal proteins of bladder cancer cells
133877450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
gpW
Motif
Other DBs
NCBI-GeneID:
133877450
NCBI-ProteinID:
XP_062171744
LinkDB
All DBs
Position
9:complement(15018277..15022491)
Genome browser
AA seq
585 aa
AA seq
DB search
MASTNAISTASILCSPKQSLRRRGDHQQSNRLNFRQPRSRFAVRAAAKDIAFDQNSRSAL
QSGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREV
ASKTNDSAGDGTTTASVLAREIIKLGLLNVTSGANPVSIKRGIDKTVQGLVEELEKKARP
VKGRDDIKAVATISAGNDELIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDR
GYISPQFVTNPEKLIAEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGE
ALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQASDLGLLIENASVEQL
GLARKVTITKDSTTIIADAASKDELQARIAQLKKELAETDSVYDSEKLAERIAKLSGGVA
VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTHVPSIKDKLEDPD
ERLGADIVQKALVAPASLIAQNAGIEGEVVVEKIKNSEWEVGYNAMTDVYENLVQAGVID
PAKVTRCALQNSASVAGMVLTTQAIVVEKPKPKTPMGAPPQGLAV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaactaacgctatttcaaccgcatccattctctgctctcccaagcagagcttg
aggaggagaggtgatcatcagcaaagtaacagactgaatttcaggcaaccgcgcagccga
tttgctgtgagggctgccgcaaaggatattgcatttgaccagaattcaaggtctgcactc
cagtccggaattgataagcttgccgatgctgttgggcttactcttggtcctagggggagg
aatgttgtgttggatgaatttggaagtcctaaagtagtaaacgatggagtcacaattgct
cgagctattgagctccctgatgctatggaaaatgctggtgcagctctcattagggaggtt
gcaagtaaaactaatgactccgctggtgatgggacaaccactgcatcagttcttgctcgg
gaaatcattaaattgggtcttttaaatgtcacttctggtgcgaatccggtctcaataaag
aggggtattgataaaactgtacaaggcttggtagaagagttggagaagaaggctaggcct
gtcaaaggtcgcgatgatatcaaagctgttgctaccatatctgcggggaatgatgagctt
attggcactatgattgcggatgcaattgacaaggtcgggccagatggtgtgttgtccatt
gagtcgtcatcctcttttgagacaactgttgaagtggaggaaggaatggagattgacaga
ggttatatctccccccaatttgttacaaaccctgagaaattgattgctgaatttgagaat
gcaagagtcttggttacggatcagaagatatcagcaataaaggacataattcccctgtta
gagaagaccactcaattgagagccccattacttataattgctgaagatgtcactggggag
gccttggctacccttgttgtaaataagctgcgaggcattctcaatgttgctgccattaaa
gctcctggttttggtgagaggagaaaagccctccttcaagatattgccattttgacagga
gctgagttccaagctagtgatctgggtctgcttattgagaatgcctcagtcgagcagctt
ggtctggctaggaaggtaaccatcaccaaggactcgaccaccattattgcagatgctgca
tcaaaggatgagttacaagcaaggattgcacagttgaagaaggaattggcagagacagat
tcagtttatgactcagaaaaactagctgagagaattgccaaattgtctggcggtgtagct
gttataaaggtgggcgctgcaacagaaactgagcttgaggaccggaagctacgtattgaa
gatgccaagaatgccacttttgctgccatagaggaagggattgtgcctggtggtggtgct
gcattggttcatctttcaactcacgttccttccattaaggacaagcttgaagacccagat
gagcggttaggtgctgatattgtgcagaaggcactggtcgcaccagcatcactgatagcg
caaaatgctggaattgaaggtgaggtggttgtggaaaagataaaaaacagcgagtgggaa
gttggttacaacgctatgacagacgtgtatgagaacttggtgcaggctggagttattgac
ccagcaaaggttacacgatgtgcattgcaaaattcggcttcagttgcaggaatggtgttg
accactcaggccattgttgtggaaaagcctaaaccaaagacacccatgggtgctcctccg
caaggacttgctgtgtga
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