KEGG   Alnus glutinosa (common alder): 133877530
Entry
133877530         CDS       T10577                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
aglu  Alnus glutinosa (common alder)
Pathway
aglu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133877530
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aglu03019]
    133877530
   03041 Spliceosome [BR:aglu03041]
    133877530
Messenger RNA biogenesis [BR:aglu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133877530
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133877530
Spliceosome [BR:aglu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133877530
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 dsDNA_bind
Other DBs
NCBI-GeneID: 133877530
NCBI-ProteinID: XP_062171850
LinkDB
Position
9:12277251..12284537
AA seq 454 aa
MASKKRKSASEEEPSPKPKQVAPKPLPHEEETSLESESEEEVEEEPEDESSSSEDDGVDS
KRDTIKKLLQPFGKDQLINILIEAADKTPSITAHIIKSIDSDPIHRKIFVHGLAWDTTTE
TLTSAFNPHGPLEECNVVTDKTTGRSKGYGFVLFKTRAAARKALKQPQRKIGNRMASCQL
ACAGPVQNQPQSVASDAGCRRLYVANVGPQIAAEKLRAFFAKFGEIEDGSLGGIDKETGK
FRGYAIIVYTSVEGIRKALEEPVKFFDGSKLLCSVATEGRNAKNKMNSNNTNYVAAGAAS
GIPGVSGASLSPNGVALPMQLNPGFVSQAFSPGAVLMAQSPGFGFLNPVLGVGAGGPMNQ
VGFGFPGSYPGGVSQSLNRVGIATSMGLSQMSAGFGPQPAISSISPSVIGNYGSQAALQG
LGTYQSSQLGQSSAATRSQTGIGSVGTLPSYLGR
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggcctccaagaagcgtaaatcagcctccgaggaagaaccttctcctaagcctaaacag
gtggcacccaaaccgctccctcacgaagaagaaacctctttggaatcagaatctgaagag
gaagtagaagaggaaccagaggacgaatcatcatcatcagaagatgatggcgtggactcc
aagcgagacacaataaagaaacttctgcaaccctttggcaaagaccagctcatcaacatc
ctcatagaagccgccgacaaaaccccttccattaccgcccacataatcaagtccatcgac
tctgaccccatccaccgcaagatcttcgtgcacggcctcgcttgggacaccaccaccgaa
accctaacctccgccttcaatccgcatggtcccctcgaggaatgcaacgtcgtcacggac
aagaccaccggccgctccaagggctacgggttcgtcctcttcaagacccgcgccgcagcc
cgcaaggccctcaagcagccccagaggaagatcgggaatcggatggcctcttgccaactc
gcgtgcgccgggcccgtgcagaatcagcctcaatcggtggcttccgacgccggctgccgc
aggctctatgtggccaatgtggggccgcagattgccgctgagaagctgcgggcgttcttt
gccaagtttggggagattgaggatgggtccttgggtggtatcgataaggagacgggcaag
tttaggggatacgccataattgtttacacttcggtagagggaatcagaaaggcattggaa
gagcctgttaagttcttcgatggtagcaaattgctatgctcggtcgccaccgaaggacgt
aatgctaagaataagatgaacagtaataacacgaattatgttgctgctggtgccgcttct
ggtattcctggtgtttctggagcctcattgtccccgaacggtgttgctctaccaatgcaa
ttgaatccgggtttcgtttctcaagcattcagtccgggtgcggttttaatggctcagagt
ccaggttttgggtttctcaatccagtgttgggtgtgggcgctggcggaccgatgaatcag
gtgggattcgggttccctgggtcgtatcctggtggagtgtcccagtccttgaacagggtt
ggaattgctacttctatgggattgagtcaaatgagtgcggggtttggtccacagcctgct
attagtagtataagcccgagtgtgattggtaattatgggtctcaagccgctttgcaaggt
ttgggaacatatcagagttcccaattgggtcagtcttcagcagcaacgaggtcccaaact
ggtattggatctgttggaaccttgccatcttatttggggcgctag

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