Alnus glutinosa (common alder): 133877581
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Entry
133877581 CDS
T10577
Name
(RefSeq) pseudouridine-5'-phosphate glycosidase isoform X1
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu00240
Pyrimidine metabolism
aglu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
133877581
Enzymes [BR:
aglu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
133877581
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
133877581
NCBI-ProteinID:
XP_062171927
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Position
9:complement(4088558..4097923)
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AA seq
348 aa
AA seq
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MASSAISRLSNLRRHFQPTDSNNNKGGSDGAGGGLIKISPEVSEALSHGRAVVALESTII
SHGMPYPLNLGTAKEVETIVRTNGAVPATIAILDGIPCVGLSLEELERLAILGTRAQKTA
RRDIAHVVATRGNGATTVSATMFFASMVGIPVFVTGGIGGVHRHGEQTMDVSSDLTELGR
TPVAVISAGVKSILDIPRTLEYLETKGVCVATYKTNEFPAFFTETSGCKVPCRVDSPEDC
ARLIDANMKLKLDTGILIAVPIPKEHSASGSIIECAIQGALKEARDKNITGNAETPFLLA
RVNELTGGASLASNIALVKNNAFVGARIAVALVQLRKSCNEGDAESVS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcagctatctcaagactatccaatctgcgaagacacttccaacccacggac
tcaaacaacaataaggggggcagtgatggtgctggtggtgggttaatcaagatttctcca
gaggtttctgaagccttgtcgcatggacgtgcggtggttgctcttgaatccaccattatt
tcccatggaatgccatatcctctaaatttggggacagcaaaggaggtggaaacgattgtt
aggacaaacggagccgttcctgctactattgcaattttagatggcataccatgcgtaggc
ttgagtttggaagaactggaaaggcttgctattttgggaacaagagctcagaagacagcc
cggagggacattgcacatgttgtggctaccagagggaatggagcaactactgtttctgca
acaatgttctttgcttctatggttggcatccctgtatttgtcactgggggtattggagga
gtacatagacatggcgagcaaacaatggacgtatcatctgaccttactgagcttggaagg
accccagtagcagttatctctgccggtgtaaaatcaatattagatattcccaggaccctg
gaatatttggaaacaaagggagtttgtgttgctacttacaaaaccaacgagtttccagca
ttttttacagaaacaagtggctgcaaggtgccttgtcgagtagatagcccagaagactgt
gctcggcttatagatgcaaacatgaaactgaagcttgatactggaattcttatcgcagtt
ccaattccaaaagaacactcagcttctggaagcataattgaatgtgctatacagggagca
cttaaagaggctagggataagaatataaccggaaatgctgaaactcctttcctgcttgcc
agagtgaatgaactaactggaggagcctcacttgcttcaaacattgcacttgtaaagaat
aatgcttttgttggtgcaagaatagctgtagcccttgtccagctcaggaaatcttgtaat
gaaggtgatgctgagtcagtgtcatag
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