Alnus glutinosa (common alder): 133877784
Help
Entry
133877784 CDS
T10577
Name
(RefSeq) transcription initiation factor IIB isoform X1
KO
K03124
transcription initiation factor TFIIB
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133877784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aglu03021
]
133877784
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
133877784
Prokaryotic type
Archaeal type
TFB
133877784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
Zn_ribbon_LysW
TXD17-like_Trx
Motif
Other DBs
NCBI-GeneID:
133877784
NCBI-ProteinID:
XP_062172180
LinkDB
All DBs
Position
9:3676879..3683532
Genome browser
AA seq
322 aa
AA seq
DB search
MGDSYCPECKRATEVVFDHSAGDTVCSECGLVLEAHSIDEKSEWRIFANESGDNDPVRVG
GPSNPLLADGGLSTVISRPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKAIATMSDRKP
DARIWYFRLGLVATIKDRANEIYKKVEDQKPLRGRNQDAILAACLYIACRQEDKARTVKE
ICSVANGATKKEIGRAKEYIVKQLEVEMGQSMEMGTIHAGDFLRRFCSHLGMNNQAVKAA
QEAVQKSEELDIRRSPISIAAAVIYMITQLSDDKKLLKDVSLATGVAEGTIRNSYKDLYP
HIARLIPSWYAKEEDLKNLCSP
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgggggactcctactgtccggagtgcaagcgggcgacggaggtggtgttcgaccactcg
gcgggggacacggtgtgctccgagtgcggcctggtgttggaggcgcactccatagacgag
aagtcggagtggcggatcttcgctaacgagtcgggtgacaacgacccggtgcgggtgggc
gggccctccaacccgttgctggccgacggtgggctctccacggtgatttcgaggcccaat
ggggcgtccggggacttcttgtcgtcctcgttgggccgctggcagaaccgcggctccaac
ccggaccgttcgctcattcaggctttcaaggccattgccaccatgtctgacagaaagcct
gatgcaagaatttggtatttcaggttgggccttgttgcaaccataaaggatcgagcaaat
gaaatatataagaaagtagaagatcaaaaacctctcagaggacgaaatcaggatgcaatt
ttggctgcttgcctctatattgcttgtcgtcaagaagacaaggcccgcactgtgaaagaa
atttgttctgttgctaatggagccacaaagaaggaaattggccgtgcaaaagagtatatt
gtgaaacaactagaagtagaaatgggtcaatccatggaaatgggaaccatacatgccggg
gactttctgagacgtttttgctcccatcttggcatgaataatcaagcagttaaggctgct
caagaagccgtacagaaatctgaagagcttgatataaggaggagccccatatcgattgca
gcagctgtaatttacatgataactcagctgtcggatgacaagaaacttctcaaagatgtg
tctcttgccaccggggtggctgaagggacgatcaggaattcgtacaaggacctttatccc
cacattgcgaggctaataccaagttggtatgccaaggaggaagacctcaagaacctctgc
agcccatag
DBGET
integrated database retrieval system
