Alnus glutinosa (common alder): 133877792
Help
Entry
133877792 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133877792
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133877792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aglu03009
]
133877792
Ribosome biogenesis [BR:
aglu03009
]
Eukaryotic type
Pre-60S particles
GTPases
133877792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
EF-G_D2
GTP_EFTU_D2
SRPRB
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
133877792
NCBI-ProteinID:
XP_062172189
LinkDB
All DBs
Position
9:5297223..5300812
Genome browser
AA seq
1036 aa
AA seq
DB search
MVGSDSDSDSDSETRKIRNICILAHVDHGKTTLADHLIAASGGGVLHPKLAGRLRFMDYL
DEEQRRAITMKSSSIALHYKGHSVNLIDSPGHMDFCSEVSTAARLSDGALILVDAVEGVH
IQTHAVLRQCWIEKLSPCLVLNKIDRLIYELKLSPMEAYTRLLRIVHEVNGIVSGYKSEK
YLSDVDSVLAGPVGEMGDDESFEFVEDDEEDTFQPQKGNVAFVCALDGWGFGIHEFAEFY
ASKLGASAAALQKALWGPRYFNPKTKMIVGKKGIGGGNKARPMFVQFVLEPLWQVYQAAL
DADGNKGMIEKVIKSFNLSVPVRELQNKDQKVVLQAVMSRWLPLSDAILSMVVKCMPDPI
AAQSFRVSRLLPKREVLDNMVDSNVLAEAELVRKSVEACDSRIEAPCVAFVSKMFAVPVK
MLPQRGLHGEVINSPTEESGEGESDECFLAFARIFSGVLYSRQRVFVLSALYDPLKGDSM
QKHVQEAELQSMYLMMGQGLKPVASAKAGNVVAIGGLGHHILKSATLSSTRNCWPFSSMI
FQVSPTLRVAIEPSDPADMGALLRGLKLLNRADPFVEVTVSARGEHVLAAAGEVHLERCI
KDLKDRFAKVRLEVSSPLVSYKETIEGEVSHMLENLKSINAGSDYVEKTTPNGRCVVRVQ
VMKLPPTLTKVLDENSDLLGDIIGAKSGQTNKSFETRRSNIVEDENPIEVFKKRIMDAVE
KDILSMTEIDNERADKCRVKWQKLLKRIWALGPRHIGPNILFIPDFKRRGADSSILIRGS
PFVSERLGIVDESIDGDTAAETSSEVTQALSMEAERLESSVVSGFQLATASGPLCDESMW
GLAFVVEAYISPFMGQADESESHQQPEQYGIFTGQVITAVKDACRVAVLQKKPRLVEAMY
FCELNTAPEYLGPMYAVLGRRRARVSKEVMQEGSPLFTVHAYVPISESFGFADELRRWTS
GAASALLVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVPPNIARKLIDAVRRRKGLPVEE
KVVQHATKQRTLARKV
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggttggttctgattctgattctgattccgattctgagacccggaaaatccgaaacata
tgcatactagcacacgttgatcacggcaagaccacgcttgccgaccacttgatcgctgcc
tcgggtgggggcgtgctccacccgaagctggcggggcgccttcgtttcatggactatttg
gacgaggaacaaaggcgtgccatcacgatgaagagctcctccattgctcttcactacaag
ggtcactccgttaacctcatagactcccctggccacatggacttctgtagtgaagtctcc
accgccgctaggctaagcgatggtgcgttgatattggttgatgccgtggagggcgtccat
atccagactcatgccgttttgaggcaatgctggatagagaagctgtcaccgtgtttggtg
ctcaataagattgataggttgatttatgagttgaagttgagtccaatggaggcgtatacc
cggttgttgaggattgttcatgaggttaatgggattgtcagcgggtataagtcggagaag
tatttgtccgatgttgattcagtgcttgcggggccggtgggggagatgggtgatgatgag
agttttgagtttgtggaggatgatgaggaggatacatttcaaccccaaaaggggaatgta
gcttttgtgtgtgcattagatgggtggggttttggaattcatgaatttgctgagttctat
gcttcgaagcttggggcgagtgctgctgcattgcagaaggctttgtggggtccccggtat
ttcaatccaaagacgaagatgattgtggggaagaagggaattggtggaggcaataaggct
cggcccatgtttgttcagtttgtgcttgagccgctttggcaggtttaccaagcggctttg
gatgccgacgggaataaagggatgattgagaaagtgattaagtcatttaatttgtctgtt
ccagttcgtgagcttcagaacaaggaccagaaagttgtgcttcaagctgttatgagccgt
tggcttcctctgtcggatgctatattatcaatggtggttaagtgtatgccggaccctatt
gcagcacaatcatttcgtgtatcacgtttgctgccgaagagagaggtcctggataatatg
gttgattctaatgtgcttgcagaggcagaactggttagaaaatctgtcgaggcttgtgat
tcgaggattgaagctccttgtgttgcttttgtttccaagatgtttgctgtgccggtaaaa
atgcttccacaaaggggtttacatggagaggttataaacagtccaactgaagaaagtgga
gagggtgagtcggatgagtgtttccttgcatttgctaggatctttagcggggttctttat
tcaaggcagagggtttttgtgctctcagctttatatgatccactaaaaggggactcaatg
cagaagcatgtgcaggaggctgagttgcaatccatgtatttaatgatgggccaaggctta
aaaccagtggcttctgcaaaggcagggaatgttgtggcaattggaggccttggtcaccac
atactgaaaagtgcaactctgtcatcaacaaggaactgctggcctttctcaagtatgata
ttccaggtttccccaactcttagagttgctattgagccatctgatccagcggacatgggt
gcacttttgagaggtttaaagcttctgaatcgggcagacccatttgtggaggtcactgtt
tctgcaaggggtgaacatgtcctggctgctgcaggagaagttcatctagaaagatgcata
aaggatttgaaggaccggtttgcgaaagtaaggttggaagtctcttcccctcttgtgtcc
tataaagagaccattgagggagaggtttcccatatgctggagaatttaaaatcaattaat
gcaggttcagattatgttgagaagacaacaccaaatggaagatgcgtagtccgggtgcaa
gtcatgaagcttcctcctactctaacaaaggtgcttgatgaaaattctgatttacttgga
gatattattggagctaagtctgggcaaaccaataaaagttttgaaacccggagatcaaac
attgtggaagatgagaatccaattgaagtatttaagaaacgcataatggatgctgtggag
aaagatattttgtcaatgactgagattgacaatgaacgggctgacaaatgtagagtaaag
tggcaaaagcttcttaagaggatttgggcactcgggcctaggcatattggtcctaatatc
ctctttatcccggatttcaaaagaaggggtgccgactcctctattcttatacgtggttct
ccttttgtatctgagagattgggcattgtggacgagtctattgatggtgacacagctgct
gagacatcttcagaagtaactcaagcgttatccatggaagcagagcgacttgagagtagt
gttgtatcagggtttcaacttgctacagcatctggaccgttatgtgatgaatctatgtgg
ggtttggcattcgttgttgaggcttacatttctccatttatggggcaggctgatgagtcg
gaatctcaccaacaaccggagcagtatggcatcttcacaggacaggttattacagctgtc
aaagatgcttgtagggtggctgtgcttcagaagaagccgagacttgtggaagccatgtac
ttctgtgagttgaacaccgctcctgaatatttgggtcccatgtatgcagtgcttggtcga
aggcgggcccgagtgagcaaggaagtaatgcaggaaggttccccgttgttcactgtgcat
gcttatgtgccaatttctgaaagctttggtttcgccgatgaacttagaagatggacttct
ggagctgctagtgctcttcttgtgcttagccattgggaagctcttcctgaggatcctttc
tttgtacccaaaacagaggaggaaattgaagagttcggagatgggtctagtgtgcctcca
aatatagccaggaagctcattgatgctgtaagacgacggaaaggccttcctgtggaggaa
aaagtagtccagcatgcaacaaagcagaggaccttggctcgtaaagtgtag
DBGET
integrated database retrieval system
