Alnus glutinosa (common alder): 133877894
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Entry
133877894 CDS
T10577
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aglu04131
]
133877894
04121 Ubiquitin system [BR:
aglu04121
]
133877894
Enzymes [BR:
aglu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133877894
Membrane trafficking [BR:
aglu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133877894
Ubiquitin system [BR:
aglu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133877894
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
Zf_IFT144_1st
HypA
DUF3824
YxzE
Motif
Other DBs
NCBI-GeneID:
133877894
NCBI-ProteinID:
XP_062172327
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All DBs
Position
9:183405..185939
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AA seq
394 aa
AA seq
DB search
MEEAVAARYWCHMCSQTIDPIMEVEIKCPFCQSGFVEEMSSTTIRENQAQVDADTDTNFG
SDRALSLWAPILLGMMGSQPRRRRRRFRQSDFEFGDEDDEHDNDHEDGHSHGGGETELDR
ELESIMRRRRRSSATILQLLQGIRAGMASELSENSEVDRDRERDRERDRERERERLVLIN
PFSQTILVQGSYDSSRGSQSENQSPIGSLGDYFIGPGLDLLLQHLAENDPNRYGPPPAQK
EAIEALPTVTVKENLQCSVCLDDFEIGAEAKEMPCKHKFHSGCIMPWLELHCSCPVCRFQ
LPADETKRDTDGSRNSSNQRERESNERETDHGSGTNEEGDGGDGRSGSGRRFSFLWPFNG
FFSSSGGGNSSSTSSSSSANATGGGNASSQTDEN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcagtagcagcaaggtattggtgtcacatgtgctctcaaactattgatccc
atcatggaagttgagatcaaatgcccattttgccaaagcggattcgttgaagagatgagt
agcacaaccattagggagaatcaagcccaagtggacgctgatactgacaccaattttggg
tccgaccgcgccctctctctctgggcccccatattgcttggcatgatgggcagtcaaccc
cgtcgccgacgccgaagattcagacaaagtgatttcgagtttggagacgaagatgatgaa
catgacaatgaccatgaggacggccacagccacgggggaggggagaccgaattggatcgt
gaacttgagtccatcatgaggaggaggagaagaagctcagctactatacttcaattgctc
caaggcattcgagctggaatggcttctgaattgtctgagaattctgaagttgatagggat
agagagagagatagggaaagagatagagagagagaaagagagcgcctggttttgatcaac
cctttcagtcagactatcctcgttcagggttcttatgattccagcagggggagtcaaagc
gagaatcagagccccattgggtctttaggtgattatttcattgggcctggtttagattta
ttgctgcagcatttggctgagaatgatccaaatagatatggccctccacctgcgcaaaag
gaggcgattgaagcattacctactgtgacagttaaggagaacttgcagtgttcggtgtgt
ttggatgattttgagattggtgctgaagcaaaggagatgccgtgtaagcataaatttcat
agtgggtgtattatgccatggctggagcttcattgttcttgtccagtttgcaggtttcag
ttgcctgctgatgagaccaagcgtgatacagacggttctaggaacagcagcaatcagaga
gagagggagagtaatgagagggaaactgatcatggtagtggtactaacgaagaaggagat
gggggggatgggagaagtggaagtgggagaaggttttcatttctatggccttttaatggt
ttcttttcttcttctggtggagggaattcttcctcaacctcctcatcttcgtcggctaat
gcaaccggaggtggaaatgcttcctctcaaacagatgagaattga
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