Entry
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
KO
Organism
aglu Alnus glutinosa (common alder)
Pathway
Brite
KEGG Orthology (KO) [BR:aglu00001 ]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133878041
03410 Base excision repair
133878041
03420 Nucleotide excision repair
133878041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:aglu03032 ]
133878041
03400 DNA repair and recombination proteins [BR:aglu03400 ]
133878041
Enzymes [BR:aglu01000 ]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
133878041
DNA replication proteins [BR:aglu03032 ]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
133878041
DNA repair and recombination proteins [BR:aglu03400 ]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
133878041
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
9:complement(7530586..7579643)
Genome browser
AA seq
2218 aa AA seq DB search
MNGEGRWRDRRDLRSSKKQKLIRNAEEELESKLGFDLFTEGDKRLGWLLSFAPSSWEDPD
TRQVYSCVDLYFVSQDGSAFKSKYKFRPYFYAATKGKMEVEVEAYLRRRYERQIADIEIM
EKEDLDLKNHLSGLRKSYLKLSFETVQQLMNVKSDLLHVVERNQAKFDAAEAYESIITGK
REQRPQDFLDCIVDLREYDVPYHVRFAIDNDVRSGQWYDVSVSSTGLMLEKRTDLLQRAE
VHVCAFDIETTKLPLKFPDAEYDLIMMISYMVDGQGYLIINRECVGDDIEDLEYTPKPEF
EGFFKVTNVQNEVELLRHWFAHMREVKPGIYVTYNGDFFDWPFLESRAAYHGLKMSEEVG
FQCDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVCF
AKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMV
QAYKANVICPNKHQSDPEKFYNSHLLESETYIGGHVECLESGVFRSDIPTSFNLDPSAYE
QLINNLDRDLQYAVIVEGKMDLESVSNYDEVKNAIMEKLVRLRDEPIREECPLIYHLDVA
AMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYYHLKK
QIESEFVDRTDGQLSKSFLDLPKTEQQSRLKERLKKYCQKAYKRVLDKPVTELREAGICM
RENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDLVVLYDSLQLAH
KCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCVL
PGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARNNTNDQYQTLSDPINKIYKTHSECSI
EFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAEL
FDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDIVDSELLDYISESSTMSKSLVDYGGQ
KSCAVTTARRLADFLGDAMVKDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFY
VRKWCKMSSDVGIRSIIDWSYYKQRLSSSIQKIITIPAAMQKVTNPVPRVVHPDWLHKKV
REKEDKFRQRKLVDIFNSLNRNGLLKKNVDAVDTNSLMNEKIVEDLEDFRNKSSSSVNGP
RPIVRSYEVNNGQHLAKTNGQVGSLHQQTDHIENVLQESLPLQENACSTENIDRNVDYQG
WLELKKRKWKDTLERRKRQRLSNSRTPLRGNGVSELLGGVINQKDTQGRSGVSSYFRRPE
VALTRCHWQIIQLVPSSENGQFFAWVAVEGIMLKIPITVSRVFYLNSKVPVTEEFLGRRV
NKILPHGRHSYNLYEVIIKEDQFRKYSKKLAALLADPEVEGIYETKVPMEFNAILQIGCV
CKVDKTAKKRNVQDGWSLSELHMKTTTECSYLEQSVSFFYLYHSISEGRAIYIGYFPASR
IISVVVVNPYQNKDLSPSFLEKQFREACQAVSVEPPPPSNGVIVKVDYVGYVKDAEKILQ
RAINEHKHEHHGPTIAVIECPNAQSMKLGVRALDDFPCVNIPSNARDSHYQVLGWQQVAA
KIGMQRCAASSLWLNERISLSRYAHVPVGNFELDWLIFTADSFFSRALREQQQLLWISDD
GVPDLGGINEEDTCFADEVHQPVLTYPGAYRKITVELKIHHLAVNGLLKSNQVNEMEGGA
LLGYDQEMNSGAHVLNEQGGIDEDTSCAPAFRVLKKLIQRCLADAVTFGNVYADAILQHL
YRWLCSPQSKLHDPALHRILHKVMVKVFALLLAEFRKLGATIIFANFSKVIIDTGKSDLS
AAKAYCDSLLKTLQTRDLFEWIELEPLNFWHSLLFMDQYNYGGIPAKADDIIREESEVDI
VSSWNIAEYLPKKIQDHFVFIASQFMYIPWIYARKQAATRTSLPDGNLCTPSVTVAAAES
FESHMTEYLKGQISSYFTDKLLGIVHDTILHMKEVNRTENYQHISSELPQFTDKINKGDA
ALEFIKHVCAVLALDQNVQHDVLVMRKNLLKYVHVREFAPEAEFHDPCPSFILPNVICSY
CNDCRDLDLCRDSALLAQEWRCAVPQCGQPYDREVMQNALLQIVRQRERLYHLQDLVCLR
CQQVKAAHLAEQCACAGSFRCKEDLTEFRSKMQVFLNIAIHQKFQLLQECTSWILELR
NT seq
6657 nt NT seq +upstream nt +downstream nt
atgaatggcgaaggtcgatggcgcgaccgccgagacctgcggagctcgaagaagcagaag
ctaatacgcaacgccgaggaggagctagagtcgaagttaggtttcgatcttttcaccgaa
ggcgacaaacggctcggatggttgctcagcttcgcgccctcatcttgggaggatccagac
acccggcaagtctatagctgtgttgatctttattttgtttcacaggatggttctgctttc
aagtcaaaatacaaatttcgaccttatttctatgcagccacaaagggaaaaatggaagta
gaggttgaagcatatttgagacgacgctatgaaaggcaaattgctgatattgaaatcatg
gagaaagaagaccttgacctcaaaaaccatttgtctggcttgcgcaaatcttatttaaag
ctatcttttgaaactgttcaacaattaatgaatgtgaagagcgatctattgcatgttgtt
gaaagaaaccaggcaaaatttgatgctgcagaagcatatgagtccataataacaggaaaa
agagagcaaagacctcaagattttctagattgtattgttgatctccgcgagtatgatgtt
ccctaccatgttcgctttgccattgacaatgatgtacgaagtgggcagtggtatgacgtt
agtgtatccagcactggtcttatgcttgagaagaggacagatcttttgcaacgagctgaa
gtgcatgtttgtgcatttgatattgagaccacaaagcttcctttgaaatttcctgatgct
gaatatgatttaataatgatgatctcatacatggttgatggacaagggtacttgattatt
aacagagagtgtgttggagatgatatagaggacttggagtacactccaaaaccagaattt
gaagggttttttaaagtgacaaatgtgcaaaatgaggtagagcttcttagacattggttt
gcccatatgcgagaggtgaagcctggtatttatgtcacatacaatggtgatttttttgac
tggccattcttggaaagcagagcagcctatcatgggttaaaaatgagtgaagaggtagga
tttcaatgtgacaagaatcagggggaatgtcgtgctaaatttgcttgccatctagattgt
tttgcttgggtcaaacgtgatagttatctccctcaaggaagccaaggcctaaaggctgtt
actaaagcaaagttgggttatgatcccctggaggtgaatcctgaggacatggtttgcttt
gcgaaagaaaagcctcagatgatggcctcctattctgtttctgatgctgttgcaacttac
tacttgtatatgacctatgttcatcccttcattttctctcttgctactattatacccatg
tcgccagatgaggttttacgtaaaggtagtgggaccctttgtgaaatgcttcttatggtt
caggcatacaaggctaatgttatctgccctaacaaacaccaatctgacccagagaagttt
tacaatagtcaccttcttgagagtgagacgtatataggtggccatgtggaatgccttgaa
agtggggtttttagatctgatattcctactagtttcaaccttgatccatctgcctatgag
caactgatcaacaaccttgaccgggatttgcaatatgctgtaatagtagagggtaagatg
gacttggaatcggtgtccaattatgatgaagtgaagaatgctataatggaaaagcttgtc
agattgcgagatgaacctatacgcgaagaatgcccccttatttatcatcttgacgtagct
gcaatgtatccaaacattattttaacaaacaggcttcagccaccatcaatagttacagat
gaggtctgcactgcatgtgatttcaaccgtccaggcaaaacttgtctacgaaagcttgaa
tgggtttggcgtggagagacattcatggcaaagaaaagtgactattatcatttgaagaag
caaattgagtcagagtttgttgatcgtaccgatggtcagttgtcaaaatcttttcttgac
ctaccaaagacagagcaacagtcaaggctaaaggagcgtctaaagaaatactgtcagaag
gcttataaacgggtacttgacaagccagtcaccgaactccgagaagcagggatctgcatg
cgagaaaacccgttttatgttgacactgttcgtagcttccgggacagaaggtacgagtac
aaaggacttaacaaggtttggaaagggaagttgtcagaagccaaggctagtggaaattct
ataaaaatccaggaagcacaagatttggtagtgctttatgattcattacaacttgctcat
aagtgtattcttaattccttctatggatatgtcatgcgcaagggtgcaagatggtactcc
atggaaatggctggagtagtgacatatacaggagcaaaaataattcagaatgctcgctta
ttggttgaaaaaatcggaaagccacttgaattagacacagatggtatctggtgtgtgctc
cctggatcttttccggagaactttactttcaaaaccaaagacttgaagaagaagctgaca
atctcatatccgtgtgttatgcttaacgttgatgtggctagaaacaatacaaatgatcaa
taccagacgctatcagatcctatcaataaaatatataaaactcatagtgaatgctcaatt
gaatttgaagtggatggaccatacaaggcaatgattcttcctgcgtctaaggaagaagga
atcctaattaagaagcgatatgctgtttttaatgatgatggaacccttgctgagcttaaa
ggttttgagatcaagcgtagaggtgagctgaagctcatcaaagttttccaggctgagctc
ttcgataagtttctccatggatccaccttagaggaatgctattcagctgtagcttctgtc
gcaaaccgctggcttgatcttcttgataatcaaggaaaggatattgtggacagtgagctg
cttgattacatatcagaatcaagcactatgagcaagtcgttagttgactatggtggacaa
aagtcatgtgcagtgaccaccgcaagacgccttgctgattttcttggtgatgcaatggtt
aaagataagggactccgctgccagtatatagttgcatgtgaacctaaaggaacacctgta
agtgagcgtgctgttcctgttgcaatatttgaaactgatgccgaaataatgaagttttat
gtacggaaatggtgcaagatgtcatcagatgttggcattcgatccattattgactggtct
tattacaagcagaggcttagttcatcaattcagaaaattattaccattcctgcagcaatg
caaaaggttacgaatcctgttcccagggtagtccatcctgattggctgcataaaaaggtt
cgtgagaaggaggacaagtttcgacaacgcaaattagttgatatcttcaactcattgaac
aggaatggtttgttaaaaaagaatgttgatgctgttgacaccaatagtttgatgaatgaa
aaaattgtcgaagatttggaagacttccgaaacaaaagcagcagttctgtaaatggacct
agaccgattgttcgtagctatgaagttaataatggacaacatttggccaagacaaatggc
caagtaggctcccttcatcaacaaactgatcatattgaaaatgtgcttcaagagtctcta
ccgttgcaagaaaatgcttgctctactgaaaatattgacagaaatgtagattatcaaggg
tggcttgaactgaagaaaagaaagtggaaagatactttggagaggaggaagaggcaaaga
ttgagcaattcaaggactccactccggggtaacggtgtttctgaactgctgggtggtgtg
ataaatcagaaagatactcagggcagatctggtgtcagttcatactttaggaggcctgaa
gtagccctgacacgctgccactggcagattatacagctagttccgagttcagagaatggc
caattttttgcttgggttgctgtagaaggaatcatgcttaagattcctataactgtttct
agagtattttacctcaactcaaaagtacctgtaacagaagaatttctgggaaggcgtgta
aacaagattcttcctcatggaaggcatagctataacttgtacgaggttatcatcaaagaa
gatcaatttagaaaatatagcaaaaagcttgcagccctccttgcagaccctgaagttgag
gggatatatgaaacaaaggtgccaatggagtttaatgctatcctccagattggttgtgtc
tgtaaggtggacaaaacagctaagaaacgaaatgttcaggatggctggagtctgagtgaa
cttcacatgaaaactacaacagaatgttcttatctggaacaatctgtctctttcttttac
ttgtatcacagcatctctgaaggacgagctatctatattgggtattttcctgcatcaaga
ataatatctgttgtggtggttaatccatatcaaaataaagatttatcaccgtcatttctt
gagaaacaatttcgtgaagcttgccaagctgtttctgttgaaccacctcctcccagtaat
ggtgtcattgtcaaggtggactatgttggctatgttaaggatgctgaaaagattttgcaa
agagcaataaatgagcacaaacatgaacatcatgggcctacaattgctgttattgaatgc
ccaaatgctcaatcaatgaagttaggtgtacgagctctagatgatttcccatgtgtgaac
attccttccaatgctcgtgatagtcactatcaggttcttgggtggcaacaagtggctgca
aaaattggaatgcaacggtgtgctgcatcctccctgtggttgaatgagagaatctctctc
tcaagatatgctcatgtaccagtagggaatttcgaacttgactggctcatttttacagca
gatagcttcttttcaagagcattacgtgagcagcaacagttactttggatatctgatgat
ggtgttccagatctgggaggcataaatgaagaagatacctgttttgctgatgaagtccat
caacctgtacttacataccctggtgcatatagaaaaataactgtggagctaaagattcat
cacctagctgtaaatggtcttttgaaaagcaaccaagtgaatgaaatggaaggtggtgct
ttgttaggatatgaccaggagatgaattctggagcacatgttctgaatgaacagggtggc
attgatgaggatacctcatgtgcacctgcattccgtgttctgaaaaaattgatccaaagg
tgccttgctgatgcagtcacatttggaaatgtatacgctgatgcaatattgcaacatcta
tatcgatggctttgcagcccacaatcaaaacttcatgacccagctcttcaccgcatactt
cacaaggtgatggtaaaggtgtttgcactattattggcagagtttcggaaattgggtgcc
acaattatttttgcaaacttctcaaaggttattatagacacaggcaaatctgatctctct
gctgccaaagcttactgtgatagcttgcttaaaactctacaaaccagagaccttttcgag
tggattgagcttgagccactgaacttctggcattccctgcttttcatggatcagtataat
tatggaggaattcctgccaaagctgatgatatcatacgcgaggaatctgaagtggatatt
gtgtcgagctggaatattgctgaatacttacccaagaaaattcaggaccattttgttttt
attgcctctcagtttatgtatattccctggatctatgcacgaaagcaagctgcaacaaga
acctctttgccggatggcaacttgtgcaccccatcagtaaccgttgcagctgctgagagt
ttcgaatcacatatgacggaatatcttaaagggcagatcagctcttacttcacagacaaa
ctcctgggtattgttcacgataccattcttcatatgaaggaggtgaacagaactgaaaat
taccagcatatatcttccgagctcccacaattcactgataaaatcaacaaaggggatgct
gcgctcgagttcattaagcatgtctgtgctgttctggccctagaccaaaatgttcaacat
gatgttctggtgatgagaaagaatctgttaaaatatgtgcatgtgagggagtttgctcca
gaagctgagtttcatgatccttgcccatccttcatcttaccaaatgtcatttgcagctac
tgcaacgactgcagagacctggacttatgccgcgactcagctttgctggctcaggagtgg
cgctgtgctgtgccacaatgtggccaaccttatgatcgcgaggtcatgcagaatgctctt
cttcaaatcgtacgtcagagagaacgtctctaccacttgcaggatctggtgtgtcttcgg
tgccaacaggtgaaagctgcacatctagctgagcaatgtgcatgcgctggctcatttagg
tgcaaagaagatttgactgagttccggagtaagatgcaggtttttttgaacattgctatt
catcagaaatttcaacttctccaagagtgtacctcatggattttagaacttcgataa