KEGG   Alnus glutinosa (common alder): 133878174
Entry
133878174         CDS       T10577                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
aglu  Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aglu03400]
    133878174
DNA repair and recombination proteins [BR:aglu03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    133878174
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 133878174
NCBI-ProteinID: XP_062172670
LinkDB
Position
9:complement(8329735..8339759)
AA seq 1042 aa
MGNKVTNELLSTVRSVVGSEYSDMDIIRALHMAKNDATAAINIIFDMPNFKSKELPAVSR
APKAPRRNSAPEPSTAVTSSKRNGGENQIFRSLGDDANANDCACDSGEGFVEDVSRRESS
VGSEWWFVGCGEVSGLSTCKGRRVKPGDEVVFTFPLRSSSSSPSLGKVLARGRQPAAACS
EIVRFCTKESGEIGRIPNEWARCLLPLVRDKKVKVEGCCKSAPDVLGIMDTILLSIRVYI
NSSMFRKHHQTSLKAASNAAEESVVHPLPALFRLLGLTPFKKAEFTPDDLYTRKRPLNSE
NISGLGASLLPGSKSKNPSQIGNEVENEDSISDVDLDNIVGVGSSSELEEMDPPGTLQCE
LRPYQKQALHWMVQLEKGQRMNEAATTLHPCWEAYCLADKRELAVYLNAFSGDATTEFPS
SLQMARGGILADAMGLGKTIMTISLLAHSKRGGSTGSQPMSQPSSEGSEVSSMIDGWTDH
SKKQTKLSGFDKLMKQKSALMDGGNLIVCPMTLLGQWKAEIETHVRPGSLSLYVHYGQSR
PKDVRTLAQSDVVITTYGVLASEFSAENGEDNGGLYSVRWFRVVLDEAHTIKSSKSQISS
AAAALVADRRWCLTGTPIQNNLEDIYSLLRFLKVEPWGTWAWWNKLIQKPFEEGDERGLK
LVQSILKRIMLRRTKFSTDREGRPILVLPPADIQVIYCELTESEKDFYEALFKRSKVKFD
QFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTQEFSDLNKLAKRFLKGSHKAQE
GEAKDEPSRAYIQEVVEELRKGEKGECPICLEAFEDAVLTPCAHRLCRECLLASWRNPTS
GLCPVCRKNISKQDLITAPTESRFQIDVEKNWVESSKVVVLLNELENLRMSGSKSIVFSQ
WTAFLDLLQIPLSRSNIPFVRLDGTLSLQQREKVLKQFSEDSNILVLLMSLKAGGVGINL
TAASNAFVLDPWWNPAVEEQAVMRIHRIGQTKRVTIRRFIVKGTVEERMEAVQARKQRMI
SGALTDQEVRTARIEELKMLFT
NT seq 3129 nt   +upstreamnt  +downstreamnt
atggggaataaggtcacaaacgagttgttgtccaccgtccgatccgtcgtcggctcggag
tactccgacatggacataatcagagccctacacatggccaaaaacgacgccaccgccgcg
atcaacataatcttcgacatgccaaacttcaaatccaaagaattaccggccgtttccaga
gcccccaaagctcctcgccgcaactcggctcccgagcccagcaccgccgtcacgagttcg
aagcgaaatggcggagagaaccagatttttcgttctttaggcgacgacgcaaatgctaat
gattgcgcttgtgactcaggtgagggttttgtcgaggatgtgagtcggcgagagagctcg
gtcgggagcgagtggtggttcgttggctgcggtgaagtttcggggctgtcgacatgtaaa
gggaggagagtaaagcctggtgatgaagtggtgttcacgtttccactgaggagtagttct
agctcgccttcgttggggaaggttttagcgagaggacgacagcccgctgcggcttgctcg
gagattgtgaggttctgtactaaagaatccggagagattggtcgaatacctaacgaatgg
gcacggtgtcttttgccgcttgtgagagataagaaggtgaaggttgaaggttgttgtaag
tctgctcctgatgttttgggcattatggacaccattcttttgtcgataagagtatatatc
aatagttctatgttccgtaagcatcaccagacctcactcaaggcagccagcaatgccgct
gaggaatcagtagttcatcctctcccagctttgttccggttgcttggactgacccctttt
aagaaggcagaattcactcctgatgacttatacacaaggaagcgccctttaaattcagag
aatatttctggtcttggggcctcattgttacctggtagcaagtctaagaatccttctcaa
attggaaatgaagttgaaaatgaggattccatttcggatgtggatcttgacaacattgtt
ggtgttggaagtagctctgagttagaggaaatggatccccctggaactcttcagtgtgaa
cttcgaccataccaaaagcaagctcttcattggatggttcagctggagaagggacaaaga
atgaacgaggcggcaacaacacttcatccatgttgggaggcatattgtcttgctgacaag
agggagctagctgtctatttgaatgcattttcaggtgatgctacaacagaatttccaagc
tcgcttcaaatggccagaggaggaattttggctgatgcaatggggcttgggaaaaccata
atgaccatatccctcctcgcgcattcaaaaaggggtggatcaacaggtagtcagcctatg
agtcagccctcaagcgaaggaagtgaagtgagcagtatgatagatggctggactgatcac
tcaaagaagcaaacaaaattgtcaggatttgataagttgatgaagcaaaagagtgctctt
atggatgggggaaacttgattgtctgtcctatgactcttctaggccagtggaaggcagag
atcgagactcatgtgcgacctgggtctctgtccctatatgttcattatggacaaagtagg
ccaaaggatgtaagaactctggctcaaagcgatgttgtaattaccacatatggggtgtta
gcctcagaattttcggcagagaatggtgaagacaatggtggactttactcagttcgatgg
tttagagtggttcttgatgaggcacataccataaaatcctctaaaagccaaatttcctca
gcagctgctgctctagttgccgatcgccgctggtgtctaactggcacccctatccagaac
aatctggaggacatttacagtcttcttaggtttttgaaggtggaaccatggggaacttgg
gcatggtggaacaaactcattcaaaaaccatttgaggagggtgatgagagagggttaaag
ttggttcagtccattttaaagcggatcatgttgaggagaacaaaatttagcactgatcga
gaaggcaggccaattctcgttcttcctccagctgatattcaggttatctattgtgaactc
acagaaagtgaaaaagacttctatgaggccttgtttaaaagatccaaggtgaaatttgat
caatttgttgagcaagggcgggttcttcataattatgcttccatattggagttactttta
cgtcttcgccaatgttgtgatcatccatttcttgtgatgagtcgaggtgatacacaagaa
ttttctgatttgaataagctagctaaacgtttcctcaagggcagccacaaagcccaagaa
ggggaagctaaagatgagccttcacgagcttatattcaagaggtcgtggaagagctgcgt
aaaggggaaaaaggagagtgtccgatatgtcttgaagcattcgaagatgcagtattgaca
ccttgtgctcaccgcttatgccgggaatgcttattggcaagctggcgaaatcctacctct
ggtttatgtcctgtttgtaggaaaaacatcagtaagcaagatcttatcactgccccaact
gagagtcgcttccagattgatgttgagaaaaattgggtggagtcatccaaagttgttgtt
ctcttgaatgaacttgaaaatcttcgcatgtcaggctctaagagcattgtcttcagccag
tggactgcctttcttgacctcctgcagattcctctttcccggagtaacattccctttgtt
cgtctggatggaacactaagtctgcagcagcgggaaaaagtattaaagcagttttcagaa
gatagcaacatcctggtgttgctgatgtctttgaaggccggtggagttggaataaatcta
acggcagcttccaatgcctttgtcttggatccatggtggaatccagctgtagaggagcaa
gctgtcatgcgcattcatcggattggacaaacaaagagagtgacgatcagacggttcatt
gtgaagggaactgttgaggaaagaatggaagcagtgcaagcgcgtaagcagcggatgatt
tctggtgctttgaccgatcaagaagttcgaactgcacgaattgaggaattgaagatgctg
tttacttag

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