Alnus glutinosa (common alder): 133878496
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Entry
133878496 CDS
T10577
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aglu03021
]
133878496
03036 Chromosome and associated proteins [BR:
aglu03036
]
133878496
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
133878496
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
133878496
SLIK complex
133878496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
ResIII
HDA2-3
DEAD
Chromo_MIT1
DTX3L_a-b
Motif
Other DBs
NCBI-GeneID:
133878496
NCBI-ProteinID:
XP_062173037
LinkDB
All DBs
Position
9:4127901..4155062
Genome browser
AA seq
1771 aa
AA seq
DB search
MALFRNYNNETVSQSVLEEKGQGQGINRTHSSLVNQDVDATSSDKEFDMNMDVQYQSEGE
LNDTNRLQNEGAADDNVNMRASNLQPSGRRTGIAGKWGSTFWKDCQPMTRGGSDSGQDSK
SGSDYRNVEGSEDNSMDGREDRLESEDDNRKKDVGKGQRGHSDVPADEMLSDEYYEQDGE
EQRDTMHYRGFQHSIGLNSRPQSKPVANSSHVKRNPKVLNDNEDGDNDDKDADADADADY
EEEDEEDEDDPDDADFEPDSGVTSGRTGNKDKAWNGEDSDEDDDSVDDVEVSDEDSYFTK
KAKGRQQVKGGRSVGSTRERASFRASSRQRRVKSSFEEDESSAEDSDSDSEEDFKSMTRR
GVNLRKNGGRSTVSTNASGRHSEVRTSSRSVRKVSYVESDGSEEVDEGKKKKLHKEEIEA
EDGDSIEKVLWHQPKGMAEDAIRNNRSTEPVLFSHLYDAEPDWNEMEFLIKWKGQSHLHC
QWKSISELQNLSGFKKVVNYTKKVMEDVRFRKAVSREEIEVNDVSKEMDLDLIKQNSQVE
RIFADRINKDSSGNVVPEYLVKWQGLSYAEATWEKDVDITFAQDAIDEYKAREATMAVQG
KMVDFQRKKSKASLRKLDEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGK
TVQSVSMLGFLQNAQQIHGPFLVVVPLSTLSNWAKEFRKWLPDMNVIIYVGTRASREVCE
QYEIFNDKKAGRPLKFNTLLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTL
SEFSTKNKLLITGTPLQNSVEELWALLHFLDPEKFKSKDDFVQNYKNLSSFNEIELANLH
MELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVS
LLNIVVELKKCCNHPFLFESADHGYGGDSRTNDSSKVERIVLSSGKLVILDKLLVRLHET
KHRVLIFSQMVRMLDILAEYMSLRGFQFQRLDGSTKAELRQQAMEHFNAPGSEDFCFLLS
TRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQDVVNIYRFVTSKSVEEDIL
ERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGSYFDKNELSAILRFGAEELFKEDKNDEES
KKRLLSMDIDEILERAEKVEEKEPGGEQGNELLSAFKVANFCAEDDGSFWSRWIKPDAVA
HAEEALVPRAARNTKSYAEANQPEMSNKRKKKGPEPQERVQKRRKADHSVPAAPMIEGAT
CQVRRWSYGNLSKRDALRFSRAVMKFGNQSQISLIAVEVGGAVGAAPPEAQIELFDALID
GCREAVEAGNLDPKGPLLDFFGVPVKANDLLTRVQELQLLAKRISRYDDPIAQFRVLMYL
KPSTWSKGCGWNQIDDARLLLGIHYHGFGNWEKIRLDERLGLVKKIAPVELQHHETFLPR
APNLRDRANALLEMELAALGKRANAKVSRKASKKERDNLLNISVSRGRDKKGKAGSQKVN
VQMNKERRQKPTKVEPLVKEEGEMSDNEEVYEQFKEVKWMEWCEDVMIDEVKTLERLQRL
QTTSANLPKEKVLMKIRSYLQLLGRRIDQIVLEHEEEPYKQDRMTMRLWNYVSTFSNLSG
ERLHQIYSKLKQEQEEEAGVGPSHLNGSAPGPIGRDGDPNYFPPFPRHVERQRGYSNMST
YQTSEPVQKGHDTAKFEAWKRRRRAETDNHFQVQPTSVRSMSNGAPRLSDPNSLGILGAG
PSENRRFAGEKPFRTRQTGFPPRQGFSSGIK
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggctctttttaggaactataataatgaaacagtttcacagagtgtcctagaagaaaaa
ggccagggacagggcatcaacagaactcatagctcgttagtgaatcaggatgtagatgca
acttcgagtgacaaagaatttgatatgaatatggatgtgcagtatcaaagtgaaggcgaa
ctgaatgataccaataggctgcaaaatgagggagctgctgatgacaatgttaatatgagg
gcgtcaaatttgcaaccttctggaaggagaactgggatcgccggaaaatggggttcaacc
ttttggaaggactgccaacccatgaccaggggtggctctgattctgggcaggattccaaa
agtgggtctgactatagaaatgtagaggggtcagaagacaattcaatggatggcagggaa
gatagattggagtcagaagatgacaataggaaaaaagatgtgggcaagggtcagaggggc
cattctgatgtccctgcagatgagatgttatctgatgaatattatgagcaggacggagaa
gaacagagagacactatgcattatagagggtttcaacattctataggattgaattctagg
ccacaatcaaagcctgttgctaacagtagccatgtgaaaaggaatcccaaagttttaaat
gacaatgaagatggtgataatgacgacaaagatgctgatgctgatgctgatgctgattat
gaagaagaggatgaggaagatgaggatgatcctgatgatgcagacttcgagcctgattct
ggtgtcacgagtggtcgcacagggaacaaggataaagcctggaatggcgaagattctgac
gaagatgatgacagtgttgatgatgtagaagtttcggatgaagattcctattttacaaag
aaagctaagggtaggcaacaagttaaaggaggacgtagtgtagggtccactagagaacgc
gcatcatttcgtgcatctagtcgacaaagaagagtgaaatcatcatttgaagaggatgag
tcttcagcagaggattccgacagtgacagtgaagaggattttaaaagcatgaccagaaga
ggtgtaaatctccgcaaaaatggtggtcggtccactgtgtcaacaaatgcatctggacga
cacagcgaggtccgcacttctagtaggtcagttcgaaaggtgtcatatgttgaaagtgat
ggaagtgaagaagttgatgaaggcaagaagaaaaagctccacaaggaggagattgaagcg
gaagacggtgactccattgagaaggtactgtggcatcagccaaagggcatggcggaagat
gctataaggaataatagatctacagaacctgttctgtttagccacttgtatgatgccgag
ccagattggaatgagatggaattcttgataaaatggaaaggccaatcacatttgcactgc
cagtggaagtcaatctctgagctgcaaaatcttagtggttttaagaaggttgtaaattac
acgaaaaaagtgatggaggatgttaggttcaggaaggcggtctcacgtgaggagattgag
gtaaatgacgtgagcaaggagatggacttagatctcattaagcaaaacagtcaggtggag
agaatatttgcagaccgaatcaataaagatagttctggcaatgtggtaccagagtattta
gtcaagtggcaagggctatcttacgctgaagcaacatgggagaaggatgtagatatcacg
tttgctcaagatgccattgatgaatacaaggctcgtgaagctacaatggccgtccaagga
aaaatggtggatttccaacgtaagaagagcaaagcaagcttaaggaagcttgatgaacag
cctgaatggttgaaaggaggaaagcttcgtgattatcagctggagggtttgaattttctt
gttaacagttggaggaatgatacaaatgtcatcttagctgatgaaatgggtcttgggaaa
actgttcagtcagtttctatgcttggctttttacagaatgcccaacaaatccatgggcct
tttcttgttgttgtaccattatccactttgtcaaactgggcaaaagaatttaggaagtgg
cttcctgatatgaatgttattatatatgttggcacccgggcaagcagagaggtttgtgag
caatatgaaattttcaatgataaaaaagctggcaggcctttaaaatttaatacactactg
actacatatgaagtagttctgaaggataaggctgttctctccaagatcaagtggaattac
ctgatggttgatgaagctcataggttgaagaatagcgaggcacagttatacacaactctt
tcggaatttagcaccaagaacaagttgcttattactggcactcctttacaaaatagtgtg
gaagagctatgggctctgcttcacttccttgaccctgagaagttcaagagtaaggatgat
tttgttcagaattacaagaatctcagctcattcaatgagattgagcttgctaatcttcat
atggagttgaggcctcatattctccgaagagttataaaagatgtagagaagtctttgcct
ccaaaaattgagcgtattctacgggttgaaatgtcccctcttcagaagcagtactacaag
tggattttggaacgcaattttcatgacttgaacaaaggagtccgtgggaatcaggtttca
cttttaaatattgtggtagagttgaagaaatgttgcaatcatcccttcctgtttgaaagt
gcggaccatggttatggtggggactcgaggacaaatgatagcagtaaagtggagagaatt
gttttaagtagcgggaagctagtcatacttgataagcttcttgttagattacatgagaca
aagcatcgtgttctgattttttcccagatggttagaatgctggatatactagcagagtat
atgtcacttagagggtttcagtttcagaggcttgatggtagtacaaaggctgagttgcgc
cagcaggctatggaacattttaatgctcctggtagtgaggatttctgcttccttctttca
actagggcaggtggccttggtatcaaccttgcaacagctgacacagttataatatttgat
tcagattggaatccccaaaatgacttacaggcaatgagtagagctcatagaattggacaa
caagacgttgttaacatctatagatttgttacaagcaaaagtgttgaggaagatatcctg
gagcgagccaagaaaaaaatggttcttgaccatttggtgatccaaaaattaaatgcagag
ggcagattggagaagaaagaagcaaagaaagggagttactttgacaaaaatgagctgtca
gctatcttaagatttggagcagaggaactttttaaggaagacaagaatgatgaagaaagc
aagaaaagactcttaagtatggatattgatgaaattcttgaaagagcggagaaggttgaa
gagaaggaacctggtggagagcaagggaatgaattgttgagtgcttttaaggtcgccaat
ttttgtgctgaagatgatgggagcttttggagtcgttggataaaaccagacgcggtagcc
catgctgaagaagctctagttccgcgtgctgcaagaaatactaaaagctatgcggaggct
aatcaacctgagatgagtaataaaaggaaaaagaaaggacctgagcctcaggagcgagtg
cagaaacgccgcaaagctgatcattcagtcccggcagcaccaatgattgagggagctact
tgtcaagtgagaagatggtcttacgggaatttgtctaagagagatgcgttacgtttttct
cgtgcggtcatgaaatttgggaaccagagccaaatcagcttaatagctgtggaggttggg
ggtgcagttggagcagctccgcctgaagcacagattgaactcttcgatgctttgattgat
gggtgtagagaagcagttgaagcaggaaatctagacccaaaggggcctttgttggatttc
tttggtgttcctgtaaaggctaatgatcttctcacccgtgttcaagagcttcaactccta
gcgaagcgcattagtcgctatgatgaccccattgcacaattccgagtgctgatgtacctc
aaaccttcaacatggtccaaagggtgtggctggaatcagattgatgatgcaagattgctt
ctgggaatacactaccatggttttggcaattgggaaaagataaggttggatgaaaggctt
ggccttgtgaagaagattgctccagtggaacttcaacaccatgaaacctttctaccgcgt
gctccaaatttgagagaccgtgctaatgcactcctggaaatggaacttgcagctcttgga
aagagagcaaatgctaaagtgagtcgtaaggcttccaagaaggagagggacaatcttctg
aacatctcagtttctcgtggccgggataagaaaggaaaggctggatctcagaaagtcaat
gttcaaatgaacaaagagagacgtcagaaacccacgaaagttgaacctttggtaaaagag
gagggtgaaatgtcggacaatgaagaagtgtatgagcagttcaaggaagtgaaatggatg
gaatggtgtgaagatgtcatgattgacgaggtgaaaaccctggaacgtcttcagaggttg
cagaccactagtgccaatcttccaaaggaaaaggtgcttatgaaaattcggagttacttg
cagcttctaggacgaaggatagaccaaattgttttagaacatgaggaggagccgtataaa
caagataggatgaccatgcgactttggaactatgtctctaccttttcaaatctctccggg
gagagacttcatcaaatttattcaaaacttaaacaagagcaagaagaggaggcaggggtc
ggcccctcccatctcaatggctctgcacctggtccaattggccgagacggtgaccccaat
tattttcctcctttccctcggcatgttgagaggcaaagagggtacagtaatatgagtacc
taccaaacatcagaaccagttcaaaaggggcatgatacagcgaaattcgaagcatggaaa
cgaaggagaagagcagaaactgataatcatttccaggttcagcccacatctgtaagatct
atgagtaatggtgctcctcggttatctgatccaaattcattgggcattcttggggctgga
ccatctgaaaacagacgctttgctggtgagaagccttttaggacgcgtcagaccggcttc
cctccgagacaaggtttctcatcaggcattaagtag
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integrated database retrieval system
