Entry |
|
Name |
(RefSeq) THO complex subunit 4A
|
KO |
|
Organism |
aglu Alnus glutinosa (common alder)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:aglu00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133878558
09122 Translation
03013 Nucleocytoplasmic transport
133878558
03015 mRNA surveillance pathway
133878558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:aglu03019]
133878558
03041 Spliceosome [BR:aglu03041]
133878558
Messenger RNA biogenesis [BR:aglu03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133878558
TREX complex
133878558
Spliceosome [BR:aglu03041]
Complex C
Other components
EJC/TREX
133878558
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133878558
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
9:22338917..22342330
|
AA seq |
250 aa
MSTALDMALDDIIKSNKQSGSGARGRSRASAPGPGPARRIPNRAANRTGPYSTPKAPETT
WQHDLFMEENLGRASAIETGTKLYISNLDYGVSNEDIKELFAEVGDLKRYSIHYDRSGRS
KGTSEVVFSRRADAVAAVKRYNNVQLDGKPMKIEIVGTNIATPAAPPAANGTFGNSNGIP
RGGQGRAGAPGRPRGGGGGGGGGGGGGGGGGRSIGRGRGRGRGRGRGEKLSQEDLDADLE
KYHEEAKQKD |
NT seq |
753 nt +upstreamnt +downstreamnt
atgtcgaccgctttagacatggccctggacgatatcatcaagagcaacaagcagtccgga
tccggcgccagaggccgtagcagggcctccgcacccggtccgggacccgctcgccgcatc
cctaaccgcgccgccaaccgtacgggtccttattccacccccaaggcgccggagacgact
tggcagcacgatttgttcatggaagagaatttggggcgagcctctgccatagagaccggg
accaagctctacatatccaatctcgattatggtgtttccaacgaggacattaaggaactg
tttgctgaagttggtgacctcaaacgttattcaatccattacgacaggagcgggagatcg
aagggaacgtccgaagtagtcttctccagacgagcagatgctgtggctgctgttaagaga
tacaacaatgttcagcttgatgggaaaccaatgaagatagagattgtgggaacaaacatt
gcaacacctgctgcgcctccagcagctaatggcacttttggaaattcaaatgggattcca
agaggtggacaaggtagagctggtgcaccaggacggccacgtggcggcggtggtggcggc
ggcggcggtggcggtggcggcggcggtggtggccgtagcattggaaggggtcgtggacgt
ggacggggaagaggccgtggtgaaaagttatctcaagaagatcttgatgctgatctggaa
aagtatcatgaggaggcaaagcagaaagattga |