Alnus glutinosa (common alder): 133878568
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Entry
133878568 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133878568 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
aglu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133878568
03015 mRNA surveillance pathway
133878568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aglu03019
]
133878568
03041 Spliceosome [BR:
aglu03041
]
133878568
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133878568
Spliceosome [BR:
aglu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
133878568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
LsmAD
Motif
Other DBs
NCBI-GeneID:
133878568
NCBI-ProteinID:
XP_062173110
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All DBs
Position
9:24668298..24674639
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AA seq
889 aa
AA seq
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MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVEMTKVKMDVIRPWIANRVTELL
GFEDEVLINFINSLLEKKVVNGKEVQISLTGFMEKNTAKFMKELWTLLLSAQKNASGVPQ
QFLDAKEEETRKKKVEADRIAFEIEKKKDKERELEQERLKKMDGMVDTRATNSGLEPNSK
PRASSHHPEDEEEAGKRNNGVRGRYRVSRSPHSARHSPSSPRGSPSRSMSRSFSNPRSFS
GGRHQSRSVSRSPEARGRSVSSERVYRSPQRRPVTPRRRNSPLNSLSPSRRRSSYSRRRS
RSRSLYRSPSPVRRRLRSPFRRRTPSPVRRRRSPSPFRRRRSPSPIRRRRSPSPIRRRRS
PSPVRRRRTPSPVRRRSPPLVQRRSPSPVRRRSPSPIRRRSPSPIRRRSPSPLRQRPLSP
VRRRYRRSPTPRRSSPSLVRHRSPIPSRRRSPIPSRRRSPPHESSSPSPIQRTSPSPVRR
KSPKHQRSPPQSSKERIRAHEKLSPLAQRSSSSLRSPQRDARNRSETRNKVSVSMSSPEK
SPTPSKSPPQARKRVPSEDRRSFSPYKSSPVRQAGKQMIRDGSVSPARKSRHDSLEISEE
GEEPKYAREEDVDHKSKASHKRSVHSSAVNKQKDSPVKVPYKEGHSPKNIADYRATGSQA
RSDNMELRKKEEETKSEKSSRRGVRPESPGQHTSPTLYKESLVGDRQHPPYPGDGKISDE
KNRSRSNDVDNSRRRSETVQDSVGKLYHNKQAAPDDSSSEESDKHRTEEKKRRKHKRSER
KEVASDDSYDSELEDRKGAKRRRKEEKKLRKEEKRRRREERRRKKEERRAEKLKVKNKDD
AYASDGEHSARRESYPSDDEDMQAEQAKLEIELRKKALESLKAKKGISH
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcttcttccggggcacgtcggcggaccaagacactcggttttcgaacaag
caagcgaagcttatgaaatcgcagaagtttgctcctgaattggagcacctggtggaaatg
acaaaggtgaagatggatgttatcagaccgtggattgctaatagggtgactgagcttctt
gggttcgaagacgaagttcttattaacttcattaacagtcttttggagaaaaaggtagtg
aatgggaaggaggtccaaatttcacttactggattcatggagaaaaatactgcgaagttt
atgaaagagctatggacgcttcttctcagtgcacagaagaatgcaagtggtgttcctcag
cagtttttggatgccaaagaagaagaaactaggaagaagaaggtggaagcagataggata
gcatttgagattgagaagaagaaagataaggaaagagaacttgagcaagagagattgaag
aaaatggacggcatggttgatacgagggcaactaactctggtttggagccaaactcaaag
cccagagcttcgagtcaccatcctgaggatgaggaagaagctggcaagaggaacaatggt
gtgagaggaaggtacagggtttctagatctcctcattcagcccgacattctccttcatcc
cctcgaggctctccatctaggtcaatgagcagatcgttttctaatcccagaagtttttca
ggtggtagacaccagtcaaggagtgtatctagatcacctgaagctcgagggcgctctgtt
tcttcagaaagggtgtatcgctccccacaaagacggcctgtgacgcctcgtcgaaggaat
tcgcctttaaattccctctctccttcaagacgaagatcatcttattctaggcgaagatct
aggtcacgctcactttatagatcaccttctccggtgaggcgtcggttgcgttctcctttt
cgtcgtaggacaccttctcctgtgcgacgccgtagatcaccttctccttttcgacgccgt
aggtcaccttcacctatccgacgccgtagatcaccttctcctatacggcgacggagatca
ccttcacctgtgcgacggcgaagaaccccatcacctgttcgacgcagatccccacctctt
gtgcaacgtagatcaccctcacctgttcgacgtagatcgccctcacctattcggcgcaga
tcgccttcacctattcgacgtagatcaccctctcccttacgacaaagaccattgtctcct
gtgcgacggcggtataggagatctccaacaccacggcgtagctctccatcacttgtgcgg
cataggtcacctattcctagtcgtaggagatcaccaattccttcccggcgtaggtctcca
ccccatgaatcaagttctccatctcccatacaacgtacctctccatcaccagttaggagg
aaatctccaaagcaccagaggagccctccccaatcatccaaagaaaggatcagggcacat
gaaaaattgtctcctctggcacagcgatcctctagttctttgagatcaccacagagagat
gcacggaatcggagtgaaacccgcaataaagtgtcagtttcgatgtcttcaccagagaag
tctccaactccctcaaaatctccaccacaggcaaggaaaagggttcccagtgaagatagg
aggtcatttagtccatacaagagtagtcctgtgaggcaagcagggaagcaaatgattcgt
gatggcagcgtcagtcctgcacgaaaatctcgtcatgacagtctagaaataagtgaagag
ggggaagaacctaaatatgccagggaggaggatgttgatcataaatctaaggcttcgcat
aaaaggtccgtgcattcatctgctgtcaacaagcagaaagattcacctgtgaaggttcct
tacaaggaaggacattctcctaaaaacatagcagattatcgggctactggatcccaggct
cgttctgataacatggagttgagaaagaaagaagaggagacaaaaagtgagaaatcttct
aggaggggggttcgtcctgaatctcctggtcaacatacgtcacccacattgtataaagaa
tctttagtaggtgataggcaacatccaccataccctggagatggtaaaatatctgatgag
aagaaccggtctcgttcaaacgatgtggataacagtagacgtcgttcagaaactgtacaa
gattctgttggaaaactttatcataataaacaggctgctccagatgattccagttctgag
gaaagtgataagcacagaactgaagagaagaaaaggagaaagcataaaagatctgagagg
aaagaggttgcttcagatgatagttatgattctgaattagaggataggaagggggctaag
aggagaaggaaggaggaaaagaaacttcggaaggaggaaaaacgtcgacggcgtgaggaa
agacgtcgtaaaaaggaagaacggcgtgcagagaagctgaaagtgaagaataaggatgat
gcttatgcttctgatggtgaacattctgcaaggagggagtcttatccaagtgatgatgaa
gacatgcaggctgagcaggcaaagcttgagattgagttacggaagaaggctctcgaatca
cttaaagctaagaagggcatcagtcactaa
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