Alnus glutinosa (common alder): 133878612
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Entry
133878612 CDS
T10577
Name
(RefSeq) protein argonaute 5-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aglu Alnus glutinosa (common alder)
Brite
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133878612
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133878612
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133878612
microRNA pathway
RISC loading complex
133878612
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133878612
NCBI-ProteinID:
XP_062173160
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Position
9:complement(8630118..8636769)
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AA seq
979 aa
AA seq
DB search
MSSRRGGGRQPDSRRDQPSPAASQGGGRGRGGGGRGRGRGTPSTSSPAPAPEASFPANPP
PSASLAGPPSATLASSSSARPPVSSESSSSSRPPVPDSTSASGLSREMKEKLTLQAPAPP
TSSKALDFPKRPGYGTVGKKIVVRANHFLVEVLDRDLHHYDVSISPEVISKKVSRDIINQ
LVKLYIESHLGKRTPAYDGRKSLYTAGPLPFQSKEFVVKLDDDRVSPSAPVRKERQFKVT
IKLASKADIHHLRQYLSGRQLDSPQETIQALDVVLRAAPSQKYNVVGRSFFHPELGQPGE
LGNGLEYWRGFYQSLRPTQMGLSLNIDVSARAFYEPILVTDFVAKHFNFNVSKPLSDQDR
LKIKKALRGVKVEVTNRESSRSYKVTAVTTQPTSQLTFTLDDQRTRISVAQYYREKHNIA
LKNVNLPALQAGSDTKPIYLPMELCKISPGQRYSKRLNERQVTNLLRATCQRPQDRQNSI
NQMVRRNNFNGNSLVNAEFGIKVREEQSLVDARVLPSPMLLYDKQREQPRMGQWNMINKR
MINGGRVDFWTCVNFSRLHRDFPFDFCEQLISMCSSKGMVFNPNPLVPIRTAHSNQVEIA
LRDIHKQCVQKFTEIGQAGKQLQLLIIILPDITGSYGKIKRLCETELGIVSQCCQPKQAS
KLSKQYLENVSLKINVKVGGRNTVLNDALHRNIPLVTDRPTIIFGADVTHPQPGEDSSPS
IAAVVASMDWPEVTKYRGLFSTQAHREEIIQDLYKLSQDPQRGSVQGGMVRELLREFRRS
TNQIPQRIIFYRDGVSEGQFSQVLLYEMDAIRKACLSLQEGYLPPVTFVVVQKRHHTRLF
AADHGNRDQTDRSGNILPGTVVDTKICHPTGFDFYLNSHAGIQGTSRPTHYHVLYDENNF
SADSLQTLTNNLCYTFARCTRSVSIVPPAYYAHLAAFRARYYIEGDTSDSGSTAGSDGRV
EFRDLPLIKENVKDVMFYC
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcgtcgaggcggtggtaggcaacctgactctcgccgggaccagccgtccccg
gcggcttctcaaggcggcgggagaggcagaggcggaggaggaagaggaagaggtcgcggt
actccttcaacctcttctccggctcctgcaccggaagcttcctttccggcgaatcctcct
ccgtccgcttctctggctggacctccttcagcaactctagcgtcgtcgagctcggctagg
ccaccggtttcttctgagtcgtcgagttcgtctcggccaccggttccagattcgacctct
gcgtctggtctgagccgtgaaatgaaggagaagcttacattgcaggctccggcgccgccg
acgtcatcgaaggcattagactttccgaagaggcccgggtatgggaccgtcgggaagaaa
atagttgtccgcgcaaatcattttctggtggaagtcttggacagagatctccatcactac
gatgtttccatctcacctgaggttatttcaaagaaagtcagcagagatataattaaccag
ctagtaaagttgtacattgagtcacacttgggtaagcgaactcctgcatatgatggcagg
aagagcctctatacggcagggccattgccgtttcagtcgaaggagtttgttgtcaagtta
gacgatgatcgtgtctccccatctgcgccagtgagaaaggagcgtcagttcaaagtgact
atcaagttagcttctaaggctgacattcatcatcttcgacagtatttgagcggcaggcag
ctggattctcctcaagaaaccattcaagctcttgatgtggttcttagagcggccccatca
cagaagtacaacgttgtggggagatcatttttccatcctgagttgggccaaccgggtgag
ctgggcaatggtttagagtattggagagggttttatcagagtcttcgtccaacccaaatg
ggactttcccttaatattgatgtgtcagctcgggcgttctatgaaccgattcttgtgaca
gattttgttgcaaaacattttaatttcaatgtttcaaagcctctgtctgatcaagatcgt
ctgaagattaaaaaagcactgagaggagtcaaagtagaggttactaatagggagtcttcc
agaagttacaaagtcactgcggtaacaacacaaccaacgagccagttaacgtttactctt
gatgaccagagaacgagaatatcagttgctcaatattatcgtgagaaacataatattgcc
cttaagaatgtgaatctgcctgctcttcaagctgggagtgatacaaaacctatttatttg
cctatggagctttgtaagatttctcctggacagagatactctaagagattaaatgaaaga
caagtgactaatcttttaagagcaacttgccaacggcctcaagataggcaaaatagtatc
aaccagatggttaggcgaaacaattttaatggcaattcgcttgtaaatgcggagtttgga
attaaagtaagggaggaacagtcattggttgatgctcgagttttgccatctccaatgctt
ttatatgataaacaaagggagcaacctagaatggggcaatggaatatgataaacaagaga
atgatcaacggcggtcgagtggatttttggacatgtgtgaacttctcgcgactgcacaga
gattttccatttgatttttgtgagcaattgatcagtatgtgcagcagcaaaggaatggtt
ttcaacccaaaccctctggttcccatacgtacagctcattctaaccaagttgagattgct
ctcagggatattcacaagcagtgtgtgcaaaagtttacagaaattgggcaggcaggaaaa
cagcttcagctattgataattattttgcctgacatcactgggtcgtatgggaaaattaaa
cgattatgtgaaacagaacttggtattgtttctcagtgttgtcagcctaagcaagcatca
aagcttagtaagcagtatcttgaaaatgtatccctcaaaatcaatgtgaaggttggggga
cgtaacactgtgttaaatgatgctttgcatagaaatattcctcttgtgactgatcgccct
acaattatatttggtgcggatgtgacgcatccccagccaggagaggactcttctccatca
atagcagcggtagtggcttcgatggattggcctgaggtcaccaagtacagagggcttttc
tctacacaggctcatcgtgaagaaattatccaagatctctataaattatctcaggatcct
caaaggggctcagttcaaggaggaatggttagggaactacttagagaattcagaagatcc
actaatcagataccccaaaggattatattctacagagatggtgtcagtgaagggcagttc
agtcaagttctgctttatgagatggatgctataagaaaggcctgtctctcacttcaggag
ggatatctaccgcctgttacgtttgtggtggtgcagaaaagacatcatacacggcttttt
gctgcagatcatggaaatcgtgatcagactgaccggagtgggaatattcttccaggtact
gttgtcgataccaagatttgccatccaacggggttcgacttttacctcaacagccatgct
ggaattcagggaactagccggccgacacactaccatgtgttgtatgatgagaacaatttc
agtgcagattccttacagacgttaacaaacaatttatgttacacgtttgcaaggtgcact
cgatcagtttcaatagtgcctccggcgtattatgcccatttggcggcattccgagcacga
tactacattgagggtgacacatcggacagcggctccacagctgggagtgacggcagagtg
gagttccgggaccttcctctgatcaaggaaaacgtgaaggacgtgatgttttattgctga
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