KEGG   Alnus glutinosa (common alder): 133878801
Entry
133878801         CDS       T10577                                 
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
aglu  Alnus glutinosa (common alder)
Pathway
aglu03030  DNA replication
Brite
KEGG Orthology (KO) [BR:aglu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    133878801
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aglu03032]
    133878801
Enzymes [BR:aglu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     133878801
DNA replication proteins [BR:aglu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    133878801
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     133878801
SSDB
Motif
Pfam: Dna2 AAA_12 AAA_11 AAA_30 AAA_19 UvrD-helicase Cas_Cas4 nSTAND3 ResIII bpMoxR
Other DBs
NCBI-GeneID: 133878801
NCBI-ProteinID: XP_062173323
LinkDB
Position
10:23164472..23176649
AA seq 1407 aa
MPPRKKPNSSSSSSASTSTSSSSKKSNPTNQPQPSKFGIQHFFERHTQNALLASQNPKPA
SPSNAAVSTSQNPATDAPSSGPQTSRLPVRNPINDPENAPNLQKPDPSHKGSAHRDTKNL
SGSQANGPNSASQNTPTDNIAVRGVSSDENLSEVSPEVSKSVSLKRFKFSPGMLIKQSQD
DGGDEVTWKISPVNEKLQAVSKRIPEMMRVLADSSRLNALHLRQCSQNKTSPGTSGKVEK
WLSSPTKKAAEKSLLSTNRVGLKRVNPDQDMDLYGNESQLTSTGVASRQSPFRTPPSLSY
CHDKIANGVACNRASDQLGLRQHKKALLELLDQVEDVISVEDSLSSDMEAYSSKSHDRND
DEMPVKVDPAVERVAVDLPEEVTGGSSNCNFLVLEVSERCKPADSSGTQCPYKVLRLLNE
HSGEERAVYLWEDWFYSVVAPGDTVNVIGEFDDEGKCDIDRDSNFIIVHPDILLSGTRVS
GSFSCSRRTVLDERLKSSEYSTAALIGTLLHQIFQAGLMKEVPTVQFLEEYARVVLQKNI
ESLYACGVNENDIQKTLIEAVPKMLNWIITFKDSQVSKAPSVDFGSDDGLKKVNLSEVID
IEEMAWAPKYGLKGMIDASVRVRITSNKNQANEKIMPLEFKTGKVSNGQSSMEHCAQVIF
YTLLMSERYKKHIDRGLLYYLQSDQTQGIVVRRSDLVGLIMRRNELANDILKASTVQQLP
PMIQSLNMCKGCRHLNVCSIYHKAHGGSTETSGLGDVFDSHTSHLTVPHCTFLRHWDRLI
DLEAREIELVKKKIWRSHSLKHDNSTSFLSSLVLDASDELPHQKSLKENRFIYRFVYRDL
TSFNVKASNRDSSTVATSPTSDMDCTLKSGDYVILSTESGHLTIASGVITEISRFHVFVS
FSKRLRLPGSNPSSEAQNLFREVWRIDKDEFMTSFAVMRFNLVQLFLRSVQSTHLRKIIV
DLEAPKFDSGCIFSQDPAIAYVWSEKNLNDDQRRAILKILTAKDYALILGMPGTGKTSTM
VHAVKALLMRGASILLTSYTNSAVDNLLIKLKAQGIDFVRIGRHEAVHEEVRGHCFSGMN
IQSVKDVKLRLDQVKVVAVTCLGITSPLLTNKRFDVCIMDEAGQTTLPVSLGPLMFASTF
VLVGDHYQLPPLVQSTEARENGMGISLFCRLSEAHPQAISALQSQYRMCQGIMELSNALI
YGNRLRCGSSEVANAKLHFSSLKSCSLWLKEVLNPTKPVIFIDTDMLPAFEAKDKKTLNN
PIEAYIIAEVTEKLVNNGIGGEDIGIITPYNSQANLIRHAIYITTVEIHTIDKYQGRDKD
CILVSFVRSSENPRDCSSSLLGDWHRINVALTRAKKKLIMVGSCKTLSKVPLLKLLIKKV
DEQSGILRISKTEISYREELKRCSQLR
NT seq 4224 nt   +upstreamnt  +downstreamnt
atgcctccgaggaaaaagcccaattcttcttcctcctcatcagcatcaacatcaacatca
tcatcttcgaagaaatccaacccaaccaatcaaccccagccctccaagtttggcatccaa
catttcttcgagcgccacactcagaacgccctcttagcctctcagaaccccaagccggcc
tccccttccaacgccgccgtttcgacctcgcaaaaccccgccaccgatgctccgagttca
gggccacagacatcgcgtttgcctgttcgaaacccgataaatgatcccgaaaatgcgcca
aatttgcaaaaacccgacccgagtcataagggttcggcgcaccgggacactaaaaacttg
tcgggttcgcaggcgaatggcccgaatagtgcgtcgcagaatacgccgacggataatatc
gcggtgaggggtgttagttctgatgagaacctgtcggaggtgtcgccggaggtttccaag
tccgtgtctctcaagcgcttcaagttctcgcctggaatgttgataaagcagagccaggat
gatgggggtgatgaggtgacatggaagatatctccggtgaacgaaaaactccaggcagtt
tcgaagcgcataccggagatgatgagagtgttggctgactcttcaaggctcaatgcttta
caccttcggcaatgttcacagaataagacttctcccggtacatctggcaaggttgagaag
tggctttcatccccgacaaaaaaggctgctgaaaaatctctattatccacaaatagggtt
ggcttgaaaagggttaacccggatcaggatatggatttgtatggaaatgaaagtcaattg
acaagcactggagttgctagtaggcagagtccattccgaactccgccatctctgtcatat
tgccatgataagattgctaatggtgttgcatgtaatagagcatctgatcagctgggttta
agacagcacaaaaaggcactgcttgaacttttggatcaagtagaggatgtcatttctgtt
gaagactcattatctagtgacatggaggcatattcatctaagtctcatgatagaaatgat
gatgagatgcctgtcaaagttgatcctgcagtagaaagagtggcagtggatttaccagaa
gaggtcactgggggttcttccaattgtaattttcttgtattggaggtgtctgagaggtgt
aagcctgctgactcatctggtactcaatgcccatataaggttcttcgcttactgaacgag
catagtggagaagagcgtgctgtgtatttgtgggaagattggttttatagtgtagttgca
cctggagatactgtgaatgtcattggtgaatttgatgatgaaggaaagtgtgacatagat
cgtgacagtaattttataattgttcatcctgacatattgctgtctggaacacgggtttcg
ggtagtttcagttgctctaggcgaactgttctggatgagaggctaaagtccagtgagtat
tcaactgcagctttaattggtaccttgctgcaccaaatttttcaggctggacttatgaag
gaagttccaactgtacaattcttggaggaatatgcaagagtggtgctccaaaaaaacatt
gaaagcctatatgcatgtggagtaaatgaaaatgatatacagaaaaccttgattgaggct
gtcccaaaaatgttgaattggatcatcacattcaaggactcacaggtttcaaaagctcct
tctgttgattttggatctgatgatgggctgaaaaaagttaacctatctgaggtaattgat
attgaggagatggcatgggcccctaaatatggcttgaaagggatgattgatgcttctgtc
agagtcagaataacatcaaacaaaaatcaagctaatgagaagattatgcctttagagttt
aaaactgggaaagtatcgaatggccagtcatctatggaacattgtgcgcaagtaatcttt
tacactctcctcatgtctgagaggtacaaaaagcatattgatcgtggtcttttatattac
ctacagtcagatcagacgcagggaattgtggttcgaagatctgatttggttgggctaatt
atgcgtcgtaatgaacttgcaaatgatattctcaaggcatcaacagtgcaacaactaccc
ccaatgatacagagtctgaacatgtgtaaaggctgtcgccatcttaatgtttgtagcatc
tatcacaaggcacatggtggtagcactgaaaccagtggattaggagatgtgtttgattca
catactagccacctaacagttcctcattgcacattccttcggcattgggaccggttgatt
gacttagaagctagagagattgagcttgtaaagaaaaaaatctggcgttcgcatagtttg
aagcatgataattccactagtttcctttcttctcttgttcttgatgcgtcagatgaactt
ccacatcagaagtctcttaaagaaaaccggtttatttatcgttttgtgtatcgagatcta
acatctttcaatgtgaaagcgtctaatagagattcttcaactgtagccacttctccaaca
agtgatatggactgcacacttaaaagtggagactatgtgatacttagcaccgaatctggc
catctaaccattgcaagtggggtcattacagaaatcagtcgctttcacgtttttgtttct
ttttcaaagcgcctacgacttcctgggagtaatccttcttcagaagcccagaatcttttt
agagaggtttggcggattgacaaggatgaattcatgacttcatttgcagttatgaggttt
aaccttgtacaactttttctacgaagtgtgcaaagtactcatcttcggaagataattgtt
gaccttgaggctcctaaatttgacagtggatgtatattcagccaagatccagcaatagct
tatgtatggtcagagaagaatttgaatgatgatcagcgtcgagctatccttaagatactt
accgcaaaggattacgctctaatactaggaatgcctggaacgggcaagacttctacaatg
gtgcatgctgtgaaggccttgttgatgagaggcgcatccatcttgcttacatcctataca
aactccgctgttgataatttgcttataaaattaaaagctcagggcattgattttgtacgt
attggaagacatgaagctgtacatgaggaagttcggggacattgcttttcagggatgaac
atacaaagcgtcaaagatgttaaactaagattagaccaagtcaaagttgttgcagttact
tgtcttggaattaccagtcccttgctcaccaacaagagatttgatgtctgcatcatggat
gaagctggacagactaccctcccagtatctctgggacccttgatgtttgcttcaacattt
gtccttgttggtgaccattatcaactacctcctcttgtccagagcacagaggctcgggag
aatggaatggggataagcttgttttgcaggctgtcagaagcacatcctcaggcaatttca
gcactgcagagccagtaccgtatgtgtcaaggcattatggaactatcaaatgccttgata
tatggtaacagattacgttgtggttcctccgaagtagccaatgccaaacttcacttttct
agtttgaagtcttgttcattgtggctaaaggaggttttgaatccaaccaaaccagtcata
tttattgatacagatatgttgcctgcttttgaggcaaaagataaaaagactctgaataat
ccaatcgaagcttacataattgcagaggtcaccgaaaaattggtgaacaatggaatcgga
ggggaagatattggcatcattaccccttataattcccaggcaaatctcatacgccatgct
atatacataaccactgtggagatacataccattgataaataccagggaagagacaaggac
tgcatacttgtgtcatttgttaggtctagtgaaaatccaagggactgctcttcctccctt
cttggtgactggcataggattaatgtggctctcacacgtgcaaagaaaaagttgatcatg
gtagggtcatgcaaaaccctatcgaaggttccattactgaaacttctcatcaagaaagtt
gatgagcaatcaggcattctgaggatatccaagacggaaattagttacagggaagagctg
aagagatgctctcagttgagataa

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