Alnus glutinosa (common alder): 133879357
Help
Entry
133879357 CDS
T10577
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133879357
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aglu01002
]
133879357
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aglu04121
]
133879357
Enzymes [BR:
aglu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133879357
Peptidases and inhibitors [BR:
aglu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133879357
Ubiquitin system [BR:
aglu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133879357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Malt_amylase_C
Nitroreductase
Motif
Other DBs
NCBI-GeneID:
133879357
NCBI-ProteinID:
XP_062173881
LinkDB
All DBs
Position
10:3663354..3687606
Genome browser
AA seq
1120 aa
AA seq
DB search
MTLMTPPPLDQQQQQPDDEEMLVPHSDFPEGPQPMEVAQAETANTVDAQAVDDPPSARFT
WTIENFSRLNTKKLYSDIFLVGGYKWRILIFPKGNNVDHLSMYLDVADSTTLPYGWSRYA
QFSLSVVNQIHNKYSIRKETQHQFNARESDWGFTSFMPLGELYDPGRGYLVNDTCIVEAD
VAVRRVVDYWSHDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMP
SGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMK
GTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVER
LEGDNKYHAEQYGLQDARKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLD
LDRENGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTK
EDIKRALEEQYGGEEELPPANPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDI
AEHLRIRLKKEQEEKEQKRKEKAEAHLYTIIKVARNEDLVEQIGRDIYFDLVDHEKVHSF
RIQKQMSFNFFKEEVAKEFAIPVQFQRFWFWAKRQNHTYRPNRPLTPQEEVQSVGQLREV
SNKTNNAELKLFLEVEVGQDLRPVPPPEKTKDDILLFFKYYDPPKEVLRFVGRLFVKGSG
KPAETLTKLNEMAGLGPDEEIELYEEIKFEPNIMCERIDKKTTFRASQLEDGDIVCFQKS
LQVGSSDQCRYPDVPSFLEYVHNRQVVRFRSLEKPKEDEFCLELSKLHSYDDVVERVAQH
LRMDDPSKIRLTSHNCYSQQPKPQPIKYRGAEHLSDMLVHYNQTSDILYYEVLDIPLPEL
QGLKTLKVAFHHATKEEVVIHTIRLPKQSTVGDVINDLKTKVELSHPNAELRLLEVFYHK
IYKIFPLSEKIENINDQYWTLRAEEIPEEEKDLGPHDRLIHVYHFMKDTAQNQVQVQNFG
EPFFLVIHEGETLAEVKVRVQKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRR
DVYGAWEQYLGLEHTDNAPKRSYTANQNRHTFEKPVKIYN
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgactctgatgactcctcctccgttggatcagcaacagcagcaaccggacgacgaggag
atgctggtcccgcacagtgacttccccgagggtcctcagccgatggaagtagcccaagca
gaaacagcaaatacagtggacgctcaggcagtggatgatccaccgtcggcacggttcact
tggacaattgaaaatttctcaaggcttaataccaagaaactctactctgatattttcctt
gttggaggctacaaatggcggatactaatcttcccaaaggggaacaatgtcgatcatttg
tccatgtatctagatgttgcagattcaacaactttgccttatgggtggagtagatatgcc
cagttcagcttgtctgttgtcaaccaaatccataataaatactcaattagaaaagaaaca
cagcaccaatttaatgcacgggaaagtgattggggtttcacttcattcatgcctcttggt
gaactgtatgaccctggtagaggttatcttgtgaatgatacatgcatcgttgaagctgat
gttgccgtacgtagggttgttgattactggtcacatgactcaaagaaggaaacaggttat
gtcggacttaaaaaccaaggagctacatgctacatgaattctcttcttcagacattgtat
catattccttacttcagaaaggctgtgtatcatatgccaacaaccgagaatgatatgccg
tcagggagcatccctctggcgctgcagagtttattctataagctccagtatagtgacact
agcgtagcaacaaaagagttgacaaagtcttttggatgggacacttatgactcgttcatg
cagcatgatgtgcaagaacttaatagggtgctttgtgaaaagcttgaagacaaaatgaag
ggaactgttgtggagggtacaatacagcagttatttgaagggcaccatatgaattacatt
gaatgcatcaatgtggactacaagtctacaagaaaagaatcattttatgatcttcagctt
gatgtcaaaggctgtcgggatgtttatgcttcttttgacaagtatgtggaagtggaacgt
cttgagggtgataataagtatcatgctgaacaatatggtttacaggatgctaggaaaggt
gttttgttcattgattttcctcctgtccttcaacttcagctaaaacggtttgagtatgat
tttatgcgggataccatggtaaagataaatgaccgctatgagttccctttgcaacttgat
cttgatagagagaacggaaaatatctgtcgcctgaggcagacaggagtgttcgcaacctt
tacacgcttcacagtgttttggttcacagtggcggggtgcatggtggacactactatgct
tacattaggccaaccctatctgatcagtggtttaaatttgatgatgaacgagtgacaaaa
gaagatatcaagagggcattagaggagcagtatggtggtgaggaagagttgccaccagca
aatcctggattcaacaattctccatttaaatttactaaatattcaaatgcatatatgctt
gtttatatacgcgaaagtgacaaggagaaaataatttgtaatgtggatgagaaggacatt
gcagaacaccttaggataaggttgaagaaagaacaagaagaaaaggagcaaaagagaaag
gaaaaagcagaggcgcatctttatactatcataaaggttgcacgtaatgaggacctcgtt
gaacagattggaagggatatatactttgatcttgttgatcatgaaaaagttcatagtttt
cgtattcaaaagcagatgtcctttaacttcttcaaggaagaagttgccaaggagtttgct
ataccggtgcaatttcaacgtttctggttctgggcaaaacgccaaaaccatacataccgg
ccaaatcgaccactgacacctcaggaggaagtgcaatctgttggacagttgagagaagtt
tccaataagacaaataatgcagagctaaagttgtttctagaagtagaagttgggcaggat
ttacggcctgttcctcctcctgaaaagactaaagatgatattcttctattctttaaatat
tatgaccctccgaaagaggtgttacgatttgttgggaggttgtttgtcaagggtagtggt
aagccagcggaaacattgacaaaactaaatgaaatggctggtttgggtcctgatgaagaa
attgaactttatgaggaaataaagtttgagccgaatataatgtgtgaacgcattgacaag
aagaccacttttcgtgctagtcagctcgaagatggggacatcgtttgctttcagaaatcc
cttcaagttggaagcagtgatcaatgtcgctatccggatgttccttcattcttggaatat
gtgcataatcgtcaggttgttcgctttcgatctttggagaagccaaaggaggatgaattt
tgtcttgagttgtcaaaacttcacagctatgatgatgtcgtggagagagtagctcagcat
cttcgcatggatgatccatccaaaataaggctcacatctcataactgttattcccagcaa
cctaaaccccaacctatcaagtaccgaggagcggaacatttgtctgacatgttggtccac
tacaatcagacttctgacattctctattatgaagtattggatatccctctgccagaattg
caaggtctaaaaactttgaaagttgcttttcatcatgctaccaaggaagaagtagtaatc
cataccattagattaccaaaacagagcactgtcggagatgttattaacgacctaaagacg
aaggtggagttgtctcatccaaatgcagaacttaggttgcttgaagttttctatcacaag
atctataagattttcccgctcagtgaaaagattgaaaatattaatgaccagtattggaca
ttacgtgctgaggagattcctgaagaggagaaagaccttggtcctcatgatcgcttaatt
catgtgtatcattttatgaaggatacagcgcagaaccaggtgcaggttcagaattttggg
gaaccatttttcttggttatccatgagggtgagacattagctgaagttaaagtgcgcgtg
cagaaaaagttgcaagttcctgatgaggagttctctaagtggaagtttgcatttttgtca
ttgggtcgtccagagtacctccaggactcagacattgtgtccagtcggtttcagagaagg
gatgtttatggtgcttgggagcagtatcttgggttggaacacacggacaacgcacctaaa
agatcgtacacagccaatcagaatcgtcacacatttgaaaagcccgtgaaaatctacaat
tag
DBGET
integrated database retrieval system
