Alnus glutinosa (common alder): 133879824
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Entry
133879824 CDS
T10577
Name
(RefSeq) WD-40 repeat-containing protein MSI1
KO
K10752
histone-binding protein RBBP4
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03082
ATP-dependent chromatin remodeling
aglu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133879824
03083 Polycomb repressive complex
133879824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aglu03036
]
133879824
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
133879824
Histone modification proteins
HAT complexes
HATB complex
133879824
HDAC complexes
Sin3A-HDAC complex
133879824
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
133879824
PRC2.2
133879824
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
133879824
Heterochromatin formation proteins
Other heterochromatin formation proteins
133879824
Chromatin remodeling factors
NuRD complex
133879824
NuRF complex
133879824
NuRF complex (fruit fly)
133879824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
WD_LRWD1
MIOS_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
133879824
NCBI-ProteinID:
XP_062174581
LinkDB
All DBs
Position
10:complement(23306760..23312413)
Genome browser
AA seq
423 aa
AA seq
DB search
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLDDAENDARHYDDDRADVGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNSFIIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKTLDAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQHLLIWDLRTPSVSKPVHSVIAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKIDIALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQIWQMAENIYHDEDDLPEEST
KAA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagacgaggaggagatgaggggggagatagaggagaggctgatcaacgaggag
tacaagatctggaagaagaacacgccctttctttacgatctggtcatcacgcacgccctc
gagtggccgtccctcaccgtcgagtggctgccggaccgagaggagcctcccggaaaagac
tactcggtgcagaagatgattcttgggacgcacacctccgagaacgagcccaactacctc
atgctcgcgcaggtccagctgcccctcgacgacgccgagaatgacgctcgccactacgac
gacgaccgcgcagacgtcggcggcttcggctgcgccaatggcaaggtgcaaataatccag
caaataaatcatgatggagaggttaatcgtgctcgttatatgcctcagaactcgtttatc
attgccactaagacagttagtgcggaagtatatgtttttgattatagcaaacacccatct
aagcctcctctagatggtgcttgcagccctgacttgaggttgaggggccatagcactgaa
ggatatggtttatcatggagtaagtttaagcagggccatttattgagtggctctgacgat
gctcagatatgcttgtgggatattaatgctactcccaagaacaaaacgcttgacgccatg
caaatttttaaggtgcatgaaggtgttgtagaagatgttgcatggcatctgaggcatgaa
tatttgtttggttcagttggcgatgatcaacacctgcttatatgggatctccggactcca
tcagttagcaagcctgtccattctgttattgctcatcaaagtgaggttaattgcttagct
ttcaatccctttaatgaatgggttgtcgctacggggtctactgataaaactgtcaagttg
tttgatttacgcaagatcgatattgcactccacacctttgattgtcacaaggaggaggtt
ttccaagttggctggaatccaaagaatgagactatcttagcttcttgttgtcttggtagg
agactcatggtgtgggatcttagcaggattgatgaagagcaaacaccagaggatgccgaa
gatggaccgccagagttgctttttattcacggtgggcacacgagtaagatatctgatttt
tcctggaacccatgtgaagattgggttgttgctagcgtagcggaagacaacatacttcaa
atctggcagatggcagagaacatctaccatgatgaagatgatttacctgaagaatctacc
aaggctgcttag
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