Alnus glutinosa (common alder): 133880016
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Entry
133880016 CDS
T10577
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4 isoform X1
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aglu04121
]
133880016
Enzymes [BR:
aglu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133880016
Ubiquitin system [BR:
aglu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
133880016
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_Vps41
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
133880016
NCBI-ProteinID:
XP_062174854
LinkDB
All DBs
Position
10
Genome browser
AA seq
338 aa
AA seq
DB search
MSFSSYSSPPPPFLSDPTSYIPSDSSTPPHASSSSSMNPSVLIIALILFITVVACISLCL
LLRHLNRRCLRHVSSSSTNTTTATTTADSHPLSARRVSPEIHRSSIADSLPLFTFSSITR
RSSSSTTSSADCAVCLSKFEPTDQLRFLPLCCHAFHAQCIDAWLESNQSCPLCRSAIFAS
ESDLMKASLAYANGASGGESFRLEIGNVSRRRAEGESGEARRSYSIGSFEYLVDEDSEIS
MSHAHQWSVSDKEESGAFPETTEASLASEVGAGRSWLKEYVDRLSFSLSSRAMSFRSSGR
FFSGSSRRSNITGAGELDLEANRVGEEISEMFRWLSGV
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctcttcttattcttctccaccgcctccattcctgagcgatcccacaagctac
atcccctccgactcctctactccacctcatgcatcgtcttcatcatccatgaaccctagc
gtcctcatcatcgcgcttatcctcttcatcaccgtagtagcctgtatctctctctgcctc
ctcctccgccacctcaaccgccgatgcctccgccacgtgtcctcctcctccaccaacacc
accactgctaccactaccgctgactctcaccctctctccgctcgccgcgtgtctcccgaa
atccatagaagctccatcgccgactctctccctctcttcaccttctcctctatcactcgc
cgctcgtcgtccagtactacatcctctgcggactgtgcggtttgtttgtccaagttcgag
ccgaccgatcagctccgattcctccctctctgctgccatgccttccacgcgcagtgcatc
gacgcctggctcgagtccaaccagagctgtccgctctgccggtcggccatttttgcgtcg
gagtccgacctcatgaaggcctcgctcgcttacgccaacggagcctccggtggagagagt
ttccgccttgagatcggaaatgtaagccggcgaagagcggaaggagagtctggcgaggcg
cggaggtcctattccattggatcgtttgagtaccttgtagacgaagactcggagatcagt
atgagccacgcgcaccagtggagcgtatcggataaggaggagagcggagcttttccggag
acgacggaggcgagtctggcttctgaagtaggcgccggaaggagctggctcaaggagtac
gtcgataggctctcattctctctctcgtcgcgcgcgatgtcatttcgcagctccggcagg
ttcttctccggaagcagtcgccggagcaatatcactggagccggagaattggacctcgaa
gccaatcgagtcggcgaagagatcagcgagatgtttcgatggctgtcaggggtatga
DBGET
integrated database retrieval system
