Alnus glutinosa (common alder): 133880597
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Entry
133880597 CDS
T10577
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aglu04131
]
133880597
Membrane trafficking [BR:
aglu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
133880597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
133880597
NCBI-ProteinID:
XP_062175565
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All DBs
Position
10:complement(18110209..18121640)
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AA seq
1613 aa
AA seq
DB search
MASPPFELEDQTDEDFFDRLVNDEIDCTGSGASAVQNDFVDEAKALSNLSIAEVGATGVD
SGGNVGFGIDGEMGLDDLVVSASLDASEDTMVGKESDSLTPGNANEYNSVIGKESISSLP
SNTNEVSEVGIGEEGALDSTVGKNSVPSGMGVKVVQWSSFGSEVDAGGGGFDSYSDFFSE
LGDVTGDPFTSVANMGKSGTESNVVDLAASSYGQHQEGQNYGVGTGQHVKGEDLSSSQYS
ENLYPGWKYDVSTGQWYQLEGNDANANTNTNTDTNANANARAMSDEVLSDHASVANMGKS
GTESNIVDLVASSYGQHQEGQNYGVGSGKHVKGEDLSSSHYSENLYPGWKYDVSTGQWYQ
LEGNDANANTNTDTNANANVNARAMSDEVLSDHASVANMGKSGTESNVVDLAASSYGQHQ
EGQNYGVGTGQHVKGEDLSSSHYSENLYPGWKYDVSTGQWYQLEGNDANANANTDTNANA
NACAMSDGVLSDHALGAYYQQQTAQAQSVVGTVAEGCTTGSVSHQNQQSQGTMQYPAHMV
FDPQYPGWYYDTITNEWKLLESDIPISNQLKSVDNNQQYVSQNVENHGSTSLVSQEHAAN
WDGSVSSYNQQTVNMWQTQNVAKNDAIRFNGNEKLGNHYTSIGHFTDSVNHQSQFNSVGS
VVQYEQSNQSVDDSNKVLGFQSFIPNDNFPQHQSQSKKELNQFVHFLPTHLDSQKPVTFS
QQPLQSGTQFSYAPSEERSSAGRPPHALVTFGFGGKLIVMKDNSSFSTNSYGSQESVGGT
INVLKLMEVVMDQNDSSSFGWGVCDYFHALCQQSFPGPLVGGNVGNRELNKWIDEKIANF
ESPHADYRKGEVLRLLFSLLKIACQYYGKLRSPFGTDQALMESDCPESAVAKLFASVKRK
SEYGALAFCLQNLPSEEQIQATAIEVQSLLVSGRKKEALQCAQEGQLWGPALVLASQLGD
QFYGDTVKKMALNQFIAGSPLRTLCLLAAGQPADVFSSATTGSSLPGSVDAYQQAAKIGA
NCMLDEWEENLAIITANRTKDDGLVIIHLGDCLWKEHGEITAAHICYLVAEANFETYSDG
ARLCLIGANHWKFPRTYASPEAIQRTELYEYSKVLGNSQFLLLPFQPYKLIYAYMLAEVG
KVTDALKYCQAILKSLKTGRAPEVDMWRQLVSSLEERIRTHQQGGYGTNLAPTKLVGKLL
TFFDSTAHRVVGGLPPPAPSTSNNSAQHNEHAYQPGAPKVSNSQSTMAVSSLMPSVSMEP
ISEWTGENKMPNRSISEPVFGSAPTKADSSKETNSSGTQQKALASGGSSRFGRFGSQLFQ
KTVGLVLRSRPDRQARLGEKNRFYYDEKLKRWVEEGAEPPPVEEAVLPPPPTTAAFQNGM
EDYNMKDAQKTGVFHSYDGRETKSPFSSERSSGIPPIPPSSNQFSARGRVGVHSRYVDTF
NKGGGSPSNLFPSPAIAAVKPGGGSNPTFFIPSPVFAVEQTVEKPGESIRETTVSNDSPP
SSYKDYSFSSQRTSTSSSTSLQRFPSVDNIVQRRTGPMANDNSFLVPPPSRRAASWSGSL
SDASNPSMMNATRPLGEEVHRVSPSLYRPHDPSSMMLPSNRSSSGDDLHEVEL
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcctccatttgagttggaggatcagacggacgaggatttttttgatagattg
gttaatgatgagattgactgtactggatctggggctagtgctgtgcagaatgattttgta
gatgaggcaaaagcgctatctaatctaagcattgccgaagtgggtgccaccggagtagac
tctggcggcaatgttggttttgggattgatggtgaaatgggtctggatgatctagttgtg
tctgcatccttagatgccagtgaggacactatggttggtaaagagagtgattcattgacc
cctggaaatgcaaatgagtataacagtgtaattggcaaagagagcatttcatcactacct
agtaatacaaatgaggttagtgaagtggggataggagaggaaggtgcattggatagtaca
gtgggtaagaatagtgtgccttcaggtatgggcgtgaaagtggttcaatggagttcattt
ggctcggaggtggatgctggcggtggtggatttgattcgtactcagatttctttagtgaa
ttgggagatgtcactggagacccatttacgagtgtggcgaatatgggcaagtcggggaca
gaatctaatgttgtggatttggcggcctcgagttatgggcaacatcaagaaggccaaaac
tatggggtgggtacggggcagcatgtaaaaggtgaggatttgagtagtagtcaatattcg
gaaaatctttatcctggttggaagtatgatgtgagcactgggcaatggtatcagttggag
ggtaatgatgcaaatgcaaacacaaacacaaacactgatactaatgcgaatgcaaatgct
cgtgcaatgagtgatgaggttctttcagaccatgcgagtgtggcgaatatgggcaagtcg
gggacagaatctaatattgtggatttggtggcctcgagttatgggcaacatcaagaaggc
caaaactatggggtgggttcagggaagcatgtaaaaggtgaggatttgagtagtagtcat
tattcggaaaatctttatcctgggtggaagtatgatgtgagcactgggcaatggtatcag
ttggagggtaatgatgcaaatgcaaacacaaacactgatactaatgcgaatgcaaatgta
aatgctcgtgcaatgagtgatgaggttctttcagaccatgcgagtgtggcgaatatgggc
aagtcggggacagaatctaatgttgtggatttggcggcctcgagttacgggcaacatcaa
gaaggccaaaactatggggtgggtacggggcagcatgtaaaaggtgaggatttgagtagt
agtcattattcggaaaatctttatcccgggtggaagtatgatgtgagcactgggcaatgg
tatcagttggagggtaatgatgcaaatgcaaacgcaaacactgatactaatgcgaatgca
aatgcttgtgcaatgagtgatggggttctttcagaccatgcattgggtgcttattatcag
cagcaaacagctcaggcacagtctgttgttggaactgtggctgagggctgtacaactggc
agtgtctctcaccagaatcagcaatctcaaggaactatgcaatatccagctcatatggtg
tttgatcctcagtatcctggttggtactatgacacaatcactaatgaatggaaattgttg
gaatctgatattccaatttcaaatcagttaaaaagtgtagataataatcagcaatatgta
agccagaatgttgagaatcatgggtcaacaagtctggttagtcaagaacatgctgcaaac
tgggatggttctgtgagcagttacaatcagcaaactgtgaatatgtggcaaactcagaat
gttgccaagaatgatgcaattagattcaatggaaatgaaaaattagggaaccattacact
tccattggccatttcactgattctgtgaatcatcaatcgcagttcaattcagttggatca
gttgttcaatatgaacagtcaaatcagagtgttgatgatagcaataaagttttggggttt
caaagctttattcctaatgacaattttcctcagcatcaaagtcagtccaagaaggagcta
aatcaatttgtgcatttcttacctactcacttggatagtcagaaaccagtaactttttca
caacagccgctccagagtgggactcagttctcttatgcacccagtgaggagaggtcatct
gcaggacgacctccacatgctctagttacttttggatttggtggaaaacttatagtcatg
aaagataatagttcctttagcacaaactcctatgggagccaggagtcggtaggaggtacg
attaatgttctcaaattgatggaagttgtcatggaccaaaatgattcttcaagctttgga
tggggtgtttgtgattatttccatgcattgtgccagcaatcttttcctggtcctttggtt
ggcggaaatgttggaaatagagagttaaacaaatggattgatgaaaagattgctaacttt
gaatctccacacgcggattacaggaaaggcgaagttttaagattgcttttttctttgctg
aaaatagcgtgtcaatattatggaaaacttcgatcaccctttggaactgaccaagcattg
atggaaagtgattgccctgagtcggctgttgctaagctctttgcttctgtcaaaagaaaa
agcgagtatggtgcacttgcattctgcttgcagaacttgccttctgaagaacagattcag
gctactgctattgaggtacagagtcttcttgtctctggtaggaagaaagaggctttgcaa
tgtgcacaggaaggtcaattgtggggtccagcacttgttcttgcatctcagcttggtgat
cagttttatggtgatactgtgaagaaaatggcacttaaccaattcatagcaggatcgcca
ttgcggactttgtgcctgcttgctgctgggcagcctgctgatgtgttttctagtgccact
actggtagcagcttacctggttctgtggatgcgtatcagcaggctgccaagattggggct
aactgcatgctagatgaatgggaagagaatctagcaatcataactgcaaacagaacgaaa
gatgatgggcttgtgatcattcatcttggagattgcctatggaaggagcacggggagatc
actgctgcacacatatgctatttagtagcagaagccaactttgaaacatattcagatggt
gcaagactttgtcttattggtgcaaatcattggaaattcccacgtacatatgctagtcct
gaggctattcagaggacagaattatatgagtactcaaaggtgctcggtaattctcaattt
ctcctcctaccttttcagccatataagcttatatatgcctacatgcttgctgaagttgga
aaagttacggatgctctgaagtactgccaagcgattttgaagtctctaaagactggtaga
gcaccagaagtggatatgtggagacagttagtatcttctcttgaggagcgaattagaacc
catcagcagggtggttatggcacaaatttggctccaaccaaactggttggtaaattgctt
accttctttgatagtactgcccatcgtgttgttgggggcctacctccacctgcaccttca
acttcgaataacagtgctcaacataatgaacatgcttatcaaccaggagccccaaaagta
tctaacagtcaatcaacaatggcagtgtcttcattaatgccttcagtttcgatggaaccc
ataagtgaatggactggtgagaacaaaatgcctaacagaagcatctcggagcctgtcttt
gggagcgcacctacaaaggctgattcgtccaaggaaacaaactcctctggtacgcaacaa
aaggcattggcatcaggtgggtcatctcgctttggtcgttttggctcacagctattccaa
aagacggtgggattggtcttaagatcccgaccagaccgacaggcaagattgggtgagaag
aatagattctattatgatgaaaagctgaagcgatgggttgaggaaggtgctgaacctcct
ccagttgaggaggcagtgttaccacctcccccaacaactgcagcctttcagaatggaatg
gaagattacaacatgaaagatgcacaaaaaaccggagtttttcactcatatgatgggcga
gaaactaaaagcccattctcttctgaacggagttctgggatcccacccattccacccagt
tcaaaccagttctctgcacggggccgggtgggcgttcactcaaggtatgttgacacattc
aacaagggtggtgggagcccatcaaacttgttcccatcacctgctattgcagctgttaaa
cctgggggtggttccaaccccactttttttatcccctctccagtttttgctgttgaacag
acagttgaaaaaccaggagaaagcattcgagagactactgtgagcaatgacagtccccct
tcttcatataaggattattcattctcttcgcaaagaacgtcgacttcatcatcaacgagt
ctacagcgatttcctagtgttgataatatcgtacaaaggagaacaggaccaatggctaat
gacaatagcttcttagttccccctccgtcccggcgtgcagcatcatggagtggaagcctt
agtgatgcaagtaatccttcaatgatgaatgcaacaagacctctaggagaagaagtgcac
agggtgtcgccatctttgtataggcctcatgatccttcatcaatgatgctcccatcaaat
cgtagtagttctggggatgatcttcatgaagttgaactttga
DBGET
integrated database retrieval system
