Alnus glutinosa (common alder): 133880983
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Entry
133880983 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133880983
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133880983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aglu03009
]
133880983
Ribosome biogenesis [BR:
aglu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
133880983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
Utp12
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
NBCH_WD40
Beta-prop_ACSF4
WDR90_beta-prop_4th
EIF3I
Beta-prop_IFT122_1st
Beta-prop_VPS8
Cytochrom_D1
PQQ_2
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
133880983
NCBI-ProteinID:
XP_062175941
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Position
1:39819262..39827587
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AA seq
628 aa
AA seq
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MGSSNIRDLLTSFSPSLDFLALSSGDGRIKIWDTLRGQIQTEFADITTTDDSNILTRPER
GHLSVDYKCMKWLSLERKRKRKLGSSLLVLGTGSGDVLALDVSAGQLKWRVNDCHPGGVS
AISSSTHGSFIYTAGADGMICEIDSLSGNLLQKFRASTKAISCMSVSSDGKILATAAAQL
KIFSGSDHKKIQKFSGHPGAVRCMTFTEDGKYILSSAVGERYVAVWRISGSKKQSASCVL
SMEHPAVFLDSRCIDSGEVDDSGLCVLAISEIGVCYLWFGQNIEELHNTKPTKVLLSFED
IPSISHKVTLPTIFAAKLQGITGPMSGQVFVAYGSLVKPSFQKILVHSGAVVKLSISNDG
VLLPMSQSRVKSKKGLDLQNGVTALDRANAEDALLPIPKVFDSNEEKKTYKETSVGADEV
MADLGDSRSQAESVEGKDDMVDLEVDTETSCLEDRLRSLGILSSGDDLTLELTVNSVIKG
IDLEADIPQKKIRASVISMAPSDAYKLLRVLVAKWQSRTCSGKYVLLWIYHIFLNHGHHV
MSQEPTTQMLNSLSKISKSRGAAIQPLLQLSGRLQLVMAQIDKASRNKTQILVPDDQTSE
SEDEDEDVDEILYGEEDDESELSSDDNN
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggctcatcaaatatcagagatttgttgacatcatttagtccttctttggacttcctt
gctctaagctctggagatggtcgaattaaaatttgggacacattgaggggtcagatccag
actgaatttgcagacatcacaacaaccgatgactcaaatatattaacgagacccgaaaga
ggacatctctcagttgattataaatgcatgaagtggttatctttggagagaaagaggaaa
aggaagcttgggtcctcattattagtcttaggaacaggtagtggtgatgttttagcactt
gatgtctctgctggtcaattgaaatggagggttaatgactgccatcctgggggtgttagt
gccatttcatcttctacacatggttcattcatttacactgcaggggctgatggtatgata
tgtgaaatagattctctgtcaggaaacttgttgcagaagttcagagcttctacgaaggca
atatcctgtatgtctgtttcgtcagatgggaagatattagctactgcagcagcacagttg
aagatttttagcggttctgatcacaaaaagattcagaagttttctgggcatcctggagct
gttcgctgtatgacttttactgaagatgggaagtacatcctctcctctgctgtgggtgaa
agatatgtagcagtatggaggataagtggcagcaaaaagcagtcagcaagctgtgttctt
tcaatggagcaccctgctgtctttcttgatagcaggtgcattgatagtggggaagttgat
gattcaggtctatgtgttttggctatttcagaaattggcgtctgttatctttggtttgga
cagaacattgaggaattacacaacaccaagcccacgaaagtcttgttatcttttgaggac
attccttctataagtcacaaggttacattacctacaatatttgctgcaaaattacaagga
attaccggacctatgtctgggcaggtctttgttgcttatggatcgctagtaaagccatca
tttcagaaaattttagtgcattctggcgcagttgtaaagttaagtatctccaacgatggg
gttcttctaccaatgagtcaatctcgtgtcaaatctaagaaaggacttgatttacaaaat
ggagttactgcattagaccgtgcaaatgcggaggatgccttacttccaattccaaaagtt
tttgattctaatgaggaaaagaaaacctataaagaaacgagtgttggtgctgatgaggta
atggctgatttgggagatagcaggagtcaagctgagtctgtggaggggaaagatgacatg
gtagatctagaagttgacactgaaacatcttgcctggaggaccggctgagatcattaggg
atactgagtagtggagatgatctgacattagagttgacagttaattctgttatcaagggt
attgatcttgaagctgatataccacaaaagaagataagggcatctgttatatctatggca
cctagtgatgcatacaagttactacgagtcttggtggccaagtggcaatcaaggacatgc
agtggaaagtatgttcttctatggatatatcatatatttttgaatcacggtcatcatgtt
atgtctcaggaaccaacaacccagatgcttaactccttatccaagatttccaaatccaga
ggtgctgccatccaacctttattacaattatcgggtcgtttgcaacttgtgatggcacag
attgacaaggcttcacggaacaaaactcaaattttggtgcctgatgatcaaaccagtgaa
agtgaggatgaggatgaggatgttgatgaaattctttatggagaagaagatgatgaatct
gaattaagcagtgatgacaataactag
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