Alnus glutinosa (common alder): 133881392
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Entry
133881392 CDS
T10577
Name
(RefSeq) WD-40 repeat-containing protein MSI3-like
KO
K10752
histone-binding protein RBBP4
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03082
ATP-dependent chromatin remodeling
aglu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133881392
03083 Polycomb repressive complex
133881392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aglu03036
]
133881392
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
133881392
Histone modification proteins
HAT complexes
HATB complex
133881392
HDAC complexes
Sin3A-HDAC complex
133881392
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
133881392
PRC2.2
133881392
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
133881392
Heterochromatin formation proteins
Other heterochromatin formation proteins
133881392
Chromatin remodeling factors
NuRD complex
133881392
NuRF complex
133881392
NuRF complex (fruit fly)
133881392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
MIOS_WD40
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
AftA_N
Motif
Other DBs
NCBI-GeneID:
133881392
NCBI-ProteinID:
XP_062176293
LinkDB
All DBs
Position
11:complement(4338859..4342960)
Genome browser
AA seq
414 aa
AA seq
DB search
MAEEQQPQQKEAALDKQVDEDYAVWRKNTPFLYDLVISHALEWPSLTVHWAPLPVPLSHA
SDSSLAVHRLVLGTHTAEGSPNFLMVADALLPREASETRVDGNAANPIVPKVEITQKIRV
DGEVNRARCMPQNPVIVGAKTSGSEVYVFDCTKQSGKQQGGDCDPDLRLRGHDMEGYGLS
WSPLKEGYLLSGSHDHKICMWDVSAVAQDRVLDALHVYEAHESVVEDVSWHSKNENLFGS
VGDDCRLIIWDLRTNQPQHSVKAHEKEVNYLSFNPYNEWILATASSDTTIGLFDTRKLSV
PLHVLSSHTEEVFQVEWDPNHETVLASSADDRRLMVWDLNRIGDEQSEGDAEDGPPELLF
SHGGHKAKISDFSWNKYQPWVIASVGEDNTVQVWQMAEGIYRDDDDMQAADDSP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaacaacaaccacaacagaaagaggctgccctggataaacaggtggacgag
gactacgccgtgtggaggaagaacacgccgttcctctacgacctggtcatctcgcacgct
ctcgaatggccgtctctcaccgtccactgggccccgcttccggtcccactgtcacacgcc
tccgactcatctctcgccgtccacaggctcgtcctcgggacccacaccgccgagggctcc
cccaacttcctcatggtcgccgacgctcttctccccagagaagcgtcggagaccagggta
gatggcaatgccgcaaatcccattgtccctaaggtggagataacacagaagatacgcgtt
gatggagaagtgaatagggcgcggtgtatgccgcagaacccggtaattgtgggtgcaaag
acaagtgggtctgaggtttatgtgtttgattgtaccaaacaatcagggaagcaacaaggg
ggtgattgtgatcctgatttgaggctaaggggtcatgatatggaagggtacgggttgtct
tggagtccccttaaggagggataccttttaagtggctcacatgaccataaaatatgtatg
tgggatgtgtctgctgtggctcaagatagggtgcttgatgcgttgcatgtttatgaggct
catgaaagtgtggttgaagatgtatcctggcactcaaagaatgaaaatttatttgggtct
gtgggtgatgattgtcggttgataatttgggacttgcgcacaaaccaaccccaacattct
gtcaaagcccacgagaaagaggtgaactatctttctttcaatccatacaatgaatggatc
ttggctacagcatcttcggataccaccattggtctctttgatacaaggaagctcagtgtg
ccgttgcatgttttaagcagtcacacagaggaagtattccaggtagaatgggatcctaac
catgagacggtgttggcatcgtctgctgatgatagaaggttgatggtttgggatcttaac
aggattggagatgagcagtcagagggagatgctgaagatggtcctccggagcttctattt
tctcatggtggccacaaagcaaagatttcggatttctcgtggaacaagtatcagccatgg
gtcattgcaagtgtgggtgaggacaacactgttcaggtttggcaaatggctgagggcata
tatcgtgatgatgatgacatgcaagcagctgatgactcaccatag
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