Alnus glutinosa (common alder): 133881572
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Entry
133881572 CDS
T10577
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133881572
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133881572
PBAF complex
133881572
GBAF(ncBAF) complex
133881572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133881572
NCBI-ProteinID:
XP_062176508
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Position
11:complement(1233010..1240138)
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AA seq
1052 aa
AA seq
DB search
MEEKRSEAGTAPAVGAESPASEPSSSRRRSGAQKRKASNFGASNFSSALSKRITREKASL
SHPPIHNGPLTRARQGPNNLAASALAPQGGAAAPAKKPNEQAMAAAAAEELSKKSELVAL
EAAMEAELEAVRSRGANAHVVPSHCGWFSWTKVHPVEEHTLPSFFNGKSEARTPNMYMEI
RNWIMKKFHSNPNTQIELKDIPELEVGDLEARQEVMEFLDHWGLINFHPFPPTDSVLPCA
DNDGAAKTDSLVEKLFRFETPELYLHVVPKTNLTTPAVPSGFFPESAIAEELARAEGPSV
EYHCNSCSADCSRKRYHCQKQADFDLCSDCFNNGKFGSGMSSLDFILMEPAEAPGLSSGK
WTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFLQMPIEDTFIDCDVDIDASSK
EIADPAFTNNDSSVPKDAPESKEIKTGASEGQPLTSPMETSNAEDTSEVKVGEESRPEDA
SEVNVDQETLGPEETSEVKGDQDVGENWALKALREAFEAVGYPPAPDNQLSFAEVGNPAM
ALAVFLARLVGPDVAIASAHSSLKSISGSSPGIQLAARHCVLLEDPPDDKKELIGSERDA
QEDRNLEGRNVKGDNSPSVLDDTDLSNGHNNKKIKDCAPEETQNGESTGKPHAAKEQDVK
ASCEEVRRHNLDDTSNSDVPKDHPQSTMKESDNLTSKVELPPSSGEEPQERTSVGEPSQP
AEALKDVHMVSDSPSAEKNELQQPVPSDSVREPPQPTEAPRDADMLSDSLPLEKNGPDQP
VTTSSVGKPQPTEASTDVDMVSDSLPSEKNEPQQPVTKKSVEEPSQTTEAPKDVVMVSDS
LPSEKNASQQPVTTISVVDKGASKGEDQIEDGKIVKPEIIERKNENKFDKVKRAAITAVS
AAAVKGKLLANQEEDHIRQLAAFLIEKQLHKLETKLAFFNEMEHVLMRVREQLDRSRQRL
YHERAQIIAARLGAPASSSRAMPPSLPTNRIATNFANSVARMPMSMTSQRPPILRPMGTV
ASSPSNPFASNTAAGSSVGPPGQDKLYSVGTK
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaagcgcagcgaagccgggactgcaccggcggttggcgccgaatcgccggct
tcggagccgtcctcgtcgcggcgccgatccggggcccagaaaagaaaggccagcaacttc
ggcgcgtcgaacttttcatccgcgctttcgaaacgaatcacacgcgagaaggcctcgctg
tcccaccctccgatccacaacggcccgttgaccagggcgcgccaaggccccaacaacctc
gccgcgtcagctctagctccgcaggggggagcggcggccccggcgaagaagcctaatgag
caggcgatggctgcggctgcggcggaggagctgagcaagaagagcgagctggtggctttg
gaggctgcgatggaagctgagcttgaggctgtcagatctcgtggcgctaatgctcacgtg
gttcccagtcattgcggttggttttcatggacaaaagttcatcctgttgaggagcacaca
ttgccttctttctttaatgggaagtctgaggctcggacacctaatatgtatatggagata
cgtaattggattatgaagaaattccattcaaatccaaacacacaaattgaattgaaagac
attccagagcttgaagttggagacttggaagcaaggcaagaggtgatggagtttttggat
cactggggtttgattaatttccatcctttcccaccaacagattccgttttgccctgtgct
gacaatgacggggcagctaaaacggattccttggttgaaaaactctttcgctttgaaaca
ccagaattgtatctgcatgttgttccgaagactaatttgacaactccagctgtgccatct
gggttttttccagagtctgcgattgctgaagagttggcaagggccgaggggccatcagtt
gagtaccactgcaactcttgttcagctgattgctctcgcaagcgctaccattgccagaag
caggcagattttgatctatgttctgattgctttaataatggaaaatttggttctggtatg
tcctcattggattttattctcatggaacctgctgaagctcctgggttaagcagtgggaaa
tggacagatcaggagacgctccttctccttgaagcactggaactttataaagaaaactgg
aatgagattgcagaacatgttgccacaaagacaaaagcgcaatgtatattgcattttctt
caaatgccaattgaggatacatttatcgattgtgatgttgatattgatgcaagttccaaa
gaaattgcagacccagctttcaccaataatgattcatctgtccctaaagatgctcctgaa
tcaaaggaaattaagactggtgctagcgagggtcagcctctgacttccccaatggaaact
tcaaatgcagaagatacaagtgaagtgaaggttggtgaggaatcaaggccggaagatgca
agtgaagtaaatgttgatcaggaaactttgggaccagaagagaccagtgaagtgaaaggt
gatcaggatgtgggtgaaaactgggcactaaaggctcttagagaagcatttgaagctgtt
ggttatcctccagcacctgataaccaactttcgtttgctgaagtgggaaaccctgccatg
gcattggcagtttttctggcacgactggtaggacctgatgttgcgattgcttcagctcac
agttcattaaaatccatatctggcagttctcctggcattcagctggctgctagacactgt
gttcttttggaagatccaccagatgacaagaaagaattgattggttctgagagggatgct
caggaagatcgaaacctggaaggcagaaacgtgaaaggggataattcaccgtcagtgttg
gatgacacagatttatctaatggccacaataacaagaaaattaaagattgtgctcctgaa
gaaactcagaatggtgaatccactgggaaaccacatgctgcaaaggaacaagatgttaaa
gcttcttgtgaggaagttagacgacataatttggatgatactagcaattcagatgttcca
aaagaccacccacaaagtactatgaaggaatcagacaatttaacatccaaggtggagctt
ccaccaagctctggggaggagccacaagagagaacttcggtaggagagccttctcaacct
gcagaggcattaaaagatgtacatatggtttctgattctccatcagccgaaaagaatgag
cttcagcaaccagttccatcagattcagtgagagagccaccacaacctacagaagcaccg
agggacgcagatatgttgtctgattctctgcccttggaaaagaatgggccggatcaacca
gtgacaaccagttctgttggaaagcctcaacctactgaggcatcaacggatgtagatatg
gtttcagattctctgccatccgaaaagaatgaacctcagcaaccagttacaaaaaaatca
gtggaggaaccctctcaaactacagaggcaccgaaggatgtagttatggtgtctgattct
ctgccatccgaaaagaatgcgtctcagcaaccagttacaactatttcagtggtcgacaag
ggagcaagtaaaggtgaggaccaaattgaagatggtaaaatagtcaaacccgagattata
gagaggaaaaatgagaacaaatttgataaagtaaagcgtgctgcaattactgcagtttcc
gcggcagcagttaagggaaaacttcttgcaaaccaggaagaagaccatatccgacaactt
gctgcatttttgatagaaaagcagttgcataagttggaaaccaagttagctttctttaat
gagatggaacatgtgctaatgagggtaagggagcaattggacaggtctaggcagaggctt
taccatgagcgggcacagataattgcagcccgacttggtgcaccagcttcgtcatctaga
gcaatgccaccttcattgcctaccaacagaattgccacaaattttgcaaactcagttgca
aggatgccaatgagcatgacatcccaaaggccaccaattttaagacccatggggacagtg
gcttctagtccttcaaacccatttgcatccaatacagcggccggaagttcagttgggcca
cccggccaggacaagctttattcagttgggacaaagtag
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