Alnus glutinosa (common alder): 133881710
Help
Entry
133881710 CDS
T10577
Name
(RefSeq) uncharacterized protein LOC133881710 isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
aglu Alnus glutinosa (common alder)
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aglu03021
]
133881710
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
133881710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Myb_DNA-bind_6
SANT_DAMP1_like
HTH_CHD6-9
M_C
Darcynin
Motif
Other DBs
NCBI-GeneID:
133881710
NCBI-ProteinID:
XP_062176697
LinkDB
All DBs
Position
11:complement(1518800..1527726)
Genome browser
AA seq
994 aa
AA seq
DB search
MDPFDDLLDEPAINRTARAGGKFQPKAKPRPRKGTSVSVPSTIISDSKEKAAVLPITDVD
ATQTIQPADTVDNKLNNTVCSSLATSAEEFLKGNEDLFSGFPNLADTTQSILVNPPSEAV
ATREDVGSIDALPSELAVSDINGDWHLSFRQSETEADSTELDVDPSADIFPEPTLNSTGS
DAAPSVHAGDVADDRLDSLGLDLDPLYDDIIDPLASKSKAGGKFQPKTKSRSGNKTSTSV
PSAPNATEEKAVRLTSTGLDTAQYAQPVVAENKLTNGDGMSVATSEIVGTQQHSKDNEGS
FSDRRSLESIEASSKFVTGGDAGSKDAHAEVSTSVRNSVWHSSIGIFSSEVDSMGFELEP
FGDVLPEAATRDSNNDGGGSLSPLEMPTLLACNNKDTNENFGIPACSSFDSLALRTCDAV
ELHTCPYPGTTQDTVSCREAPVSNKDGDIQIDNGRSETEFQEAGVFSGIETLDFISEANI
ASVRHAGKFQPKPNKRTRKEKPSTGISLPEVESIMHLQAPQLATSETGYMDEGSVPSFAA
DYPFQDNSMRFDDFIALDPTSEIPMNEELRNLPENSHSDGHFLGDILHRKDVPNVPAEAA
ESGKGETSTAPNLLQKCQKTATAVEENDGGKSSRQLRKRVACQLIDEANDEDNENGGFCA
EPPSTSNVDEDYDDGYRVESTSQKKRAPRKSKKPEAENGKPVRKRKRANEVADDSTKEPP
KKFSHSTRRNRGRVDKDLLETPWDEIDHQRLPIKDLILHAEYRERSASKEAGRSKTPLTN
LRSYNSFNEESSYNREETFASEQGRGSDDDQPNYEVQPNETLINYQSFMDKAPSTRWSKQ
DTELFYEAVRQFGTDFSMIQQLFPSRTRHQVKLKFKKEERQYPVRLSEALTSRAKDHSHF
QLVIDRLQEASQAEEHSNVEDSVGVTGEEEEEVVELTTQAKLLMCAQEEVAKPEQDEEAV
KDQDVDFAGGAQSPVKADASDDEVFNWSQYKSDY
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggacccttttgatgatcttcttgatgaacctgccatcaaccgtacagctcgggctggt
ggtaaatttcaacccaaggctaaaccacggcctagaaaaggaacatctgtctcagttcct
tcaacaatcattagtgattcaaaggaaaaggctgctgtactacccatcaccgatgtggat
gccactcaaaccattcagcctgctgatactgtagataataaattgaataatacagtttgt
tcatctctagctacctcagcggaggaatttctaaaaggcaatgaggatttgttctcaggg
tttccaaacttagccgataccacacaatccatattagtgaaccctccctctgaagctgtt
gcgaccagggaggatgtgggctccatagatgctctaccttcagagcttgcagtgtctgac
atcaatggtgactggcacttaagctttaggcaatcggagactgaggcagactctacggag
ttggatgttgacccttcagctgacatctttcccgagcctacacttaactctactggctca
gatgcagcaccatctgttcatgctggtgatgttgcagatgatagactggattccttggga
ttggatttggacccgttatatgatgatattattgatcctcttgcaagtaaatctaaggct
ggtggcaagtttcaacccaagactaaatcccgctctggaaacaaaacttctacatcagtc
ccatcagctccaaatgctacagaggaaaaggctgttagactaacctccacaggcttagac
acagcacaatatgctcagccagttgttgcagaaaataaattgacaaatggggatggtatg
tctgtagctacctcggagattgtgggtactcaacagcattcaaaagacaatgaaggttca
ttttctgacaggagaagcttggaatccattgaggcctcatccaagtttgtgactggaggg
gatgctggctctaaagatgctcatgcagaggtttcaacgtctgtcagaaacagtgtttgg
cattctagcataggaatattctcatcagaggtggactccatgggttttgaattggagccc
tttggtgatgttcttcctgaggctgccacaagagatagtaataatgatgggggaggttct
ctttctcctttagaaatgcctactcttcttgcttgcaataataaggataccaatgaaaat
tttggtattccagcttgtagttcttttgactctttagcactcaggacatgcgatgctgta
gagcttcatacttgtccttatcctggtacaacccaagacacagtaagctgtagggaagct
cctgtttctaacaaggatggtgatattcagattgacaatggaaggtcggaaacagagttt
caggaagctggggtcttttctggcatcgaaaccctagattttatttctgaggccaatatt
gcatctgtacggcatgctggcaagtttcaacccaagcccaataaaagaacaagaaaagag
aaacctagtactggcatctctctcccagaagttgagtctattatgcatctgcaggctcct
cagctggctacttctgaaactggatacatggatgagggctcagttccttcctttgcagct
gactatccttttcaggataactccatgaggtttgatgattttattgccttggatccaaca
tctgaaattccaatgaatgaagaattgagaaatcttccagaaaattctcactcagatggt
cactttttgggggatattctgcatcggaaggatgttcctaatgttcctgcagaggctgct
gaaagtggaaaaggagaaacttctactgcaccaaatcttcttcagaaatgccaaaaaact
gctacagctgttgaagagaacgatggtgggaaatcgtcgaggcagctgaggaagcgagta
gcttgccaacttattgatgaggcgaatgatgaggataatgaaaatggtggcttctgcgct
gaacctcccagtacttctaatgtagatgaagactatgatgatggatatagagtggagagt
acatcccagaagaaaagagctccaagaaagtcaaagaaacctgaggctgaaaatggaaag
cctgtacgaaagcgtaagagggccaatgaagtagcagacgactcaaccaaggaacctccc
aaaaaattttctcattcaactcgtcgaaatagaggacgcgttgacaaggatttacttgaa
accccgtgggatgaaattgaccatcaaaggttgcctatcaaggatcttattttgcatgca
gagtatagggagcgatcagcgagcaaagaggcaggaagatcaaaaacacccttgaccaat
ttaagatcttacaattcctttaacgaggaatcatcttataatagagaggagacctttgct
tcagaacagggcagaggctctgatgatgatcaaccgaactatgaggttcaaccaaatgaa
actctcattaattaccagtctttcatggacaaagctcccagtacaagatggtcaaaacaa
gacacagaactgttctatgaggctgttcggcagtttgggacagatttttctatgatacaa
caactttttcccagtcgaacacgtcatcaagtcaagttgaaatttaagaaggaagagcgt
caatatcccgtaaggctttctgaagccctgacaagtcgtgccaaagatcattcccatttc
caattggtgattgatcgcctgcaagaagcttctcaggcagaagaacactctaatgtagag
gactcagttggtgtaacaggcgaggaggaggaggaggtggtggaattgacaactcaagcc
aagttattgatgtgtgcgcaggaggaagtggcaaaacctgagcaggatgaggaagcagtt
aaagatcaggatgtagattttgccggaggagctcaaagtccagtgaaggctgatgcaagc
gatgatgaggtctttaactggagtcaatataaaagtgattattag
DBGET
integrated database retrieval system
