Alnus glutinosa (common alder): 133882045
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Entry
133882045 CDS
T10577
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aglu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133882045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aglu03041
]
133882045
Spliceosome [BR:
aglu03041
]
Common components
Common spliceosomal components
SR proteins
133882045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
133882045
NCBI-ProteinID:
XP_062177121
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All DBs
Position
11:15743308..15749765
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AA seq
259 aa
AA seq
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MSHFGRTGPPDIADTYSLLVLNITFRTTADDLFPYFDKYGKVVDIFIPRNRRTGDSRGFA
FVRYKYADEAQKAVERLDGKVVDGREITVQFAKYGPNAERIQKGRIIESFPKSRSRSPRR
RSRDDYRDRDYRRRSRSRSFDRYDRDRYGRDRDIRHRSRSRSVSPDYHKARGRGRYDDER
QSRSRSRSRSRSRSINSASPARHSPSPRRSPSPRRSRSLRDESPDRRSRDRRSPIPRSVS
PRGRPADSRSQSPRKSDDE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggaaggacaggccctccggacatcgcagacacctattctctccttgtc
ctcaacatcacctttcgtacgactgcagatgatctattcccgtattttgataagtacggc
aaggtcgtggatatctttatccccaggaatcggaggactggtgactcaaggggctttgca
tttgtgcggtacaaatacgctgatgaggcacagaaagcagtggaaaggctagatggaaaa
gttgttgatggtcgagagataacagttcagtttgccaaatatgggccaaatgcagagcgg
attcagaaagggaggattattgaatcgttcccaaagtcaagaagtcgcagtcctcggaga
aggtcccgggatgactacagagatcgtgattacaggagaagaagccgcagtcgaagtttt
gataggtatgatcgtgacaggtatgggagggacagggatattcgtcaccggagcaggagc
cgtagtgtgagtcctgattaccataaggcccgaggaagaggccgttatgatgatgagcgc
caaagccgaagccgaagtcgaagtcgaagtcggagtcgatcaatcaatagtgcatcacct
gctcggcatagccctagtcctcgcagaagtccttccccacgtaggtctcggtctcttagg
gatgaaagtcctgataggcgtagccgcgatagacggtccccaattcctcgtagtgtttcg
cctaggggtcgtcctgctgattctcgaagccaatcccctcggaagtcggatgatgaatga
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