Alnus glutinosa (common alder): 133882128
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Entry
133882128 CDS
T10577
Name
(RefSeq) eukaryotic initiation factor 4A-3 isoform X1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03013
Nucleocytoplasmic transport
aglu03015
mRNA surveillance pathway
aglu03040
Spliceosome
Brite
Enzymes [BR:
aglu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133882128
Messenger RNA biogenesis [BR:
aglu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133882128
mRNA cycle factors
Stress granule specific factors
133882128
Spliceosome [BR:
aglu03041
]
Complex C
Other components
EJC/TREX
133882128
Ribosome biogenesis [BR:
aglu03009
]
Eukaryotic type
90S particles
Helicases
133882128
Translation factors [BR:
aglu03012
]
Eukaryotic type
Initiation factors
eIF-4
133882128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133882128
NCBI-ProteinID:
XP_062177220
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Position
11:18172956..18178898
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AA seq
409 aa
AA seq
DB search
MADVGGTSVVRPNARRVSAPEEALEFETSREVEVVTSFDQMGIKDDLLRGIYNYGFEKPS
AIQQRAVVPILHGRDVIAQAQSGTGKTSMIALTVCQKVDTATREVQALILSPTRELASQT
EKVILAIGNYINIQVHACIGGKSMSEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRHIK
ILVLDESDEMLSRGFKDQIYDLYRYLPPELQVCLISATLPHEILEMTNKFMTDPIRILVK
RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRTNNF
TVSSMHGDMPQRERDAIMAEFRAGQTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYI
HRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtgggcggaaccagcgtggtgcggccgaacgcgcggcgagtgagcgcgccg
gaggaggcgctggagttcgagacgtcgcgggaggtggaggtggtgaccagcttcgaccag
atgggcatcaaggacgacctgctccgcggaatctacaactacggcttcgagaagccctcg
gcgatccagcagcgcgccgtggtgcccatactccacggccgagacgttatagcccaggcc
cagtccggcacgggcaagacctccatgatcgccctcaccgtttgccagaaggtcgatact
gccaccagagaagtccaggccttgatcctgtcaccaacaagggaattggcatctcagaca
gagaaggtgattttggcaattggtaattatataaatattcaagtacatgcatgcatcgga
ggtaagagtatgagtgaagatatcagaaagttagaacatggagttcatgtggtgtccgga
actccaggcagagtgtgtgacatgatcaagaggagaacactgcgtacgagacatatcaaa
atactagttcttgatgaatctgatgagatgttgagcagagggttcaaggatcagatttat
gatctgtacagatatctcccaccagaacttcaggtttgcttgatttctgctacccttccc
catgaaattttggagatgacaaacaagtttatgacagatcctatacggatacttgtgaaa
cgtgatgagttgactctggagggaatcaagcaattttttgttgctgttgaaagggaagag
tggaagtttgatactctatgtgatctttatgacacccttacgatcacccaagctgttata
ttctgcaacacaaagcgaaaggtggattggctaactgaaaagatgcgtaccaataacttc
actgtttcatcaatgcatggagacatgcctcaaagggagagagatgcaattatggcagag
tttcgggccggtcaaacccgagtactgataacgacagatgtttgggcccgagggcttgat
gttcaacaggtttccctggtgatcaattatgaccttccaaacaatcgtgagctttacatt
catcggattggtcgttctggtcgttttggaagaaagggtgttgcaataaactttgtgaaa
agtgacgacattaaaatcctaagagacatagagcagtactacagtactcagattgacgag
atgccaatgaatgttgctgatctgatataa
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