Alnus glutinosa (common alder): 133882363
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Entry
133882363 CDS
T10577
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
aglu Alnus glutinosa (common alder)
Pathway
aglu03022
Basal transcription factors
Brite
Transcription machinery [BR:
aglu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133882363
Coactivators
SAGA/TFTC/STAGA complex
133882363
Chromosome and associated proteins [BR:
aglu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
133882363
STAGA complex
133882363
TFTC complex
133882363
SAGA complex
133882363
SLIK complex
133882363
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133882363
NCBI-ProteinID:
XP_062177495
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Position
11:800514..808611
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AA seq
543 aa
AA seq
DB search
MSVVPKEAIEVVAQSIGITNLSPDVALALAPDVEYRVREIMQEAIKCMRHSRRTSLTSDD
VDSALKLRNVDPIYGFTSGDSLRFKRAAGHKDLFYIDDKDVELKTVIEAPLPKAPLDTSV
TAHWLAIEGVQPAIPENAPVEALAVPSDGKKSENTEDRLPIDLKLPVKHVLSRELQLYYE
KIKELTVNKSGSVLFKQALVSLATDSGLHPLVPYFTYFVADEVTRNLNNFPLLFALMRVV
RRLLQNPHIHIEPYLQQLMPSVITCLVAKRLGNRSSDNHWELRNFTANLVASICKSFFRY
GHVYHNLQPRVTRTLLHAFLDPTKALPQHFGAIQGLAALGPNVVRLLILPNLEPYLQLLA
PEMLLEKQKNEMKRLEAWRVYGALLFAAGQCMYDRLKMFRSLFFPPTRAIWKINGKVATT
MLNKRKASTDNLMQQPPHKKIATDGTMGVIPTNSIQTDRQGAAGGYSTAVGGSNVGLSSM
SRPLPTENMSGKEVGGRVAKASTVVSQAWKEDMDAGHLLASSSEFFGESLYSFAPKPELS
FFL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgtgccaaaggaggcaattgaggtcgttgcacagagcattggaatcacaaat
ttgtccccagatgttgctctcgctcttgctcctgacgtcgagtaccgggtccgcgagatc
atgcaggaggcaattaaatgcatgcgccactcgaggcggactagtctgacatccgatgat
gtggatagtgctcttaagttaagaaatgtggatccaatatatggctttacatctggagat
tccctgaggttcaaaagggctgctggacacaaggatttattctatattgatgacaaggat
gtggaacttaaaaccgtgattgaagcacctttgcctaaagcaccacttgatacatcagtt
actgctcactggctggcaattgaaggtgttcagcctgcaattccagaaaatgctccagtt
gaagcacttgcagtgccatctgatggcaaaaaatctgagaacacagaagatagacttccc
attgaccttaaattacctgttaagcatgttctatccagggagcttcagctatattatgaa
aaaatcaaagagttgactgtgaataagtctggttccgtcctcttcaaacaagcattagtg
agcttggcaacagattcaggactgcatcccttagttccttacttcacatacttcgtcgct
gatgaggttacacgtaatttaaataatttccctctcctatttgctttgatgcgtgttgtt
cgaaggcttcttcaaaatccacacattcatatcgaaccttatctacaacaattgatgcca
tctgttattacatgccttgtcgcaaaaagattagggaatagatcttctgacaatcattgg
gagcttaggaacttcacagcaaacctagttgcttcaatatgcaaaagctttttcagatat
gggcatgtttatcacaatcttcagccacgtgtcacaaggactctgcttcatgcattctta
gacccgaccaaagcattgcctcaacattttggtgctattcagggactagcagcccttgga
cccaatgtggttcgtctgctcatattaccaaatcttgagccatatttgcaactgttggca
ccagaaatgctacttgagaagcaaaagaacgaaatgaagaggcttgaagcttggcgtgtt
tatggggccttgctgtttgcggctggccaatgcatgtacgatcggctcaagatgttccgc
agtttgttctttccaccaactcgtgccatctggaagatcaatggaaaagttgcaactacc
atgctaaataaacgcaaggcgagcacggacaacttgatgcagcaaccaccacacaaaaaa
atagcaacagacggcacaatgggtgtaataccaacgaactccattcaaactgacaggcaa
ggggctgcaggtgggtattcaactgctgtagggggctccaatgttggtttatcatcaatg
tcacggccgttaccaactgaaaacatgtctggaaaggaggttggtggtagagtggcaaaa
gcgtccactgttgtctctcaggcttggaaggaggacatggatgcaggacatttgttggca
tcttcgtctgaattttttggtgaaagtttgtactcctttgccccaaaacctgagttgtcc
ttcttcttgtga
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