KEGG   Agromyces badenianii: DCE93_01330
Entry
DCE93_01330       CDS       T05411                                 
Name
(GenBank) DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
agm  Agromyces badenianii
Brite
KEGG Orthology (KO) [BR:agm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agm03032]
    DCE93_01330
   03400 DNA repair and recombination proteins [BR:agm03400]
    DCE93_01330
Enzymes [BR:agm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     DCE93_01330
DNA replication proteins [BR:agm03032]
 Prokaryotic type
  DNA Topoisomerases
   DCE93_01330
DNA repair and recombination proteins [BR:agm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      DCE93_01330
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact
Other DBs
NCBI-ProteinID: AWB94480
UniProt: A0A2S0WT60
LinkDB
Position
complement(285222..286205)
AA seq 327 aa
MPRLKRVEPYVSPGFTRVRRGRGFLYVHSDGGTAGRAERARIADLAIPPAWQEVWISDAP
NAHILAVGVDAAGRRQYRYHPVWRERQDAEKFLRMAALAEALPGARRAVARDLALDELPR
ERVLAAAFRTLDLGAIRIGSEESLAGFRSRGLTTLLVRNARLDDVETVRFRFRAKGGIPQ
DMRVTDASLAAFVERAGERSAAARLYAWSGGRSMRAAAPVDVNDDIRDRTGGDFTAKDFR
TLRGTIAAADRLAELGPAGTGRARTSAIREAIEEASRVLGNTPAIAKGSYVDPRVLSAYE
RGVVVASGPDRERRLLELLGPAAEDAA
NT seq 984 nt   +upstreamnt  +downstreamnt
atgccgcgcctcaaacgcgtcgagccctacgtctcgcccgggttcacccgggtgagacga
gggcgcggcttcctgtatgtgcacagcgacggcggcaccgccggtcgagccgaacgggcg
cgcatcgccgatctcgcgatcccgccggcatggcaggaggtctggatctcggatgctccg
aatgcacacatcctcgccgtcggcgtcgatgccgccggccggcgccagtaccgctaccac
ccggtctggcgcgaacgacaggacgccgagaagttcctgcgcatggccgccctggccgag
gcgctgccgggcgcccgccgcgccgtcgcccgagacctggcgctcgacgagctgcctcgg
gaacgcgtgctcgccgcggcgttccgcaccctcgatctcggagcgatccgcatcggttcg
gaggaatcgctcgccggattccgcagccgcggcctcacgacgctcctcgtgcggaacgca
cggctcgacgacgtggagaccgtgcggttccgcttccgcgcgaagggcggcatcccacag
gacatgcgggtgacggatgcctcgctcgccgcgttcgtcgagcgagccggcgagcgctcg
gccgccgcccggctctacgcctggtcgggcggacggtcgatgcgcgctgcggcccccgtc
gacgtgaacgacgacatccgcgatcgcacgggcggcgacttcaccgcgaaggacttccgc
acgttgcggggaacgatcgccgccgccgaccgactcgccgagctcggacccgcgggcacc
gggcgggcgcgcacctcggcgatccgcgaggcgatcgaggaggcgtcgcgcgtgctcggc
aacacccccgcgatcgcgaagggcagctatgtcgacccgcgcgtgctgagcgcctacgag
cgcggggtggtcgtggcatccggccccgatcgggaacgccgtctgctcgagctgctcgga
ccggcggccgaagacgcggcctga

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