Agromyces badenianii: DCE93_01330
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Entry
DCE93_01330 CDS
T05411
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
agm
Agromyces badenianii
Brite
KEGG Orthology (KO) [BR:
agm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
agm03032
]
DCE93_01330
03400 DNA repair and recombination proteins [BR:
agm03400
]
DCE93_01330
Enzymes [BR:
agm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DCE93_01330
DNA replication proteins [BR:
agm03032
]
Prokaryotic type
DNA Topoisomerases
DCE93_01330
DNA repair and recombination proteins [BR:
agm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DCE93_01330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AWB94480
UniProt:
A0A2S0WT60
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All DBs
Position
complement(285222..286205)
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AA seq
327 aa
AA seq
DB search
MPRLKRVEPYVSPGFTRVRRGRGFLYVHSDGGTAGRAERARIADLAIPPAWQEVWISDAP
NAHILAVGVDAAGRRQYRYHPVWRERQDAEKFLRMAALAEALPGARRAVARDLALDELPR
ERVLAAAFRTLDLGAIRIGSEESLAGFRSRGLTTLLVRNARLDDVETVRFRFRAKGGIPQ
DMRVTDASLAAFVERAGERSAAARLYAWSGGRSMRAAAPVDVNDDIRDRTGGDFTAKDFR
TLRGTIAAADRLAELGPAGTGRARTSAIREAIEEASRVLGNTPAIAKGSYVDPRVLSAYE
RGVVVASGPDRERRLLELLGPAAEDAA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctcaaacgcgtcgagccctacgtctcgcccgggttcacccgggtgagacga
gggcgcggcttcctgtatgtgcacagcgacggcggcaccgccggtcgagccgaacgggcg
cgcatcgccgatctcgcgatcccgccggcatggcaggaggtctggatctcggatgctccg
aatgcacacatcctcgccgtcggcgtcgatgccgccggccggcgccagtaccgctaccac
ccggtctggcgcgaacgacaggacgccgagaagttcctgcgcatggccgccctggccgag
gcgctgccgggcgcccgccgcgccgtcgcccgagacctggcgctcgacgagctgcctcgg
gaacgcgtgctcgccgcggcgttccgcaccctcgatctcggagcgatccgcatcggttcg
gaggaatcgctcgccggattccgcagccgcggcctcacgacgctcctcgtgcggaacgca
cggctcgacgacgtggagaccgtgcggttccgcttccgcgcgaagggcggcatcccacag
gacatgcgggtgacggatgcctcgctcgccgcgttcgtcgagcgagccggcgagcgctcg
gccgccgcccggctctacgcctggtcgggcggacggtcgatgcgcgctgcggcccccgtc
gacgtgaacgacgacatccgcgatcgcacgggcggcgacttcaccgcgaaggacttccgc
acgttgcggggaacgatcgccgccgccgaccgactcgccgagctcggacccgcgggcacc
gggcgggcgcgcacctcggcgatccgcgaggcgatcgaggaggcgtcgcgcgtgctcggc
aacacccccgcgatcgcgaagggcagctatgtcgacccgcgcgtgctgagcgcctacgag
cgcggggtggtcgtggcatccggccccgatcgggaacgccgtctgctcgagctgctcgga
ccggcggccgaagacgcggcctga
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integrated database retrieval system