KEGG   Agromyces badenianii: DCE93_03970
Entry
DCE93_03970       CDS       T05411                                 
Name
(GenBank) endonuclease VIII
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
agm  Agromyces badenianii
Pathway
agm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:agm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DCE93_03970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:agm03400]
    DCE93_03970
Enzymes [BR:agm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     DCE93_03970
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     DCE93_03970
DNA repair and recombination proteins [BR:agm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DCE93_03970
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS NFACT_N Ribosomal_S13 Zn_ribbon_TFIIB
Other DBs
NCBI-ProteinID: AWB96783
UniProt: A0A2S0WZK2
LinkDB
Position
821276..822133
AA seq 285 aa
MPESPEVQALVEDLGARLSGHELTGVDVVEFRATKTRARPPSSLRGERVRGVERHGKHVD
IRVGASDVDAQHLIVSLGRHGWARYSSPEADAPAADAPPTLVAFTFDDGAVVEFTDAGDW
VSLGCWVVDDPRDVPAVAKLGPDPADPAFSRADFDQMVAGRRKQVKAVLQEQESLAGIGN
AYSDEILHTAKISPVAHAASLTDAELDRLFEATVGIITAAIDTQRGVPIDQLKAAKVAAM
RVHGRAGEACPVCGDTVLDFSFASTTAQYCPTCQTGGERLPLRSA
NT seq 858 nt   +upstreamnt  +downstreamnt
atgccagagtcgcctgaagtgcaggccctcgtcgaggatctcggcgcccggctgtcgggc
cacgagctcactggcgtggacgtcgtcgagttccgtgcgacgaagacgcgcgcgaggcct
ccgtcgtcgcttcgcggcgagcgggtgcgtggcgtcgagcggcacggcaagcatgtcgac
atccgcgtcggcgccagcgacgtcgacgcacagcacctgatcgtctcactcggtcggcat
ggctgggcgcgatactcgagccctgaagcggatgccccggccgcagatgccccgccgacg
ctcgtcgccttcaccttcgacgacggcgcggtcgtcgagttcacggatgccggtgattgg
gtgtcgctcggctgctgggtcgtcgatgacccgcgcgacgttccggcggtcgccaagctc
ggccctgatcccgccgatccggcgttctcgcgggcggacttcgaccagatggtcgccggc
cgccgcaagcaggtgaaggccgtgctgcaagaacaggagtcgctcgccgggatcggcaac
gcgtactccgacgagatcctgcacacggcgaagatctcacccgtcgcgcatgccgcatcg
ctgacggatgccgagctcgatcgcctcttcgaggcgacggtgggcatcatcaccgccgcg
atcgacacgcagcgcggtgtgccgatcgatcagctgaaggccgccaaggtcgctgccatg
cgcgtgcacggcagggccggcgaagcatgcccggtctgcggcgacaccgtgctcgacttc
tcgttcgcgagcacgacggcgcagtactgcccgacgtgccagacgggcggcgaacgcctg
ccgctgcgctccgcgtag

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