Agromyces badenianii: DCE93_04055
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Entry
DCE93_04055 CDS
T05411
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
agm
Agromyces badenianii
Pathway
agm00260
Glycine, serine and threonine metabolism
agm00630
Glyoxylate and dicarboxylate metabolism
agm00670
One carbon pool by folate
agm00785
Lipoic acid metabolism
agm01100
Metabolic pathways
agm01110
Biosynthesis of secondary metabolites
agm01200
Carbon metabolism
Module
agm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
agm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DCE93_04055 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DCE93_04055 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DCE93_04055 (gcvP)
00670 One carbon pool by folate
DCE93_04055 (gcvP)
Enzymes [BR:
agm01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
DCE93_04055 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
TPIP1
Motif
Other DBs
NCBI-ProteinID:
AWB94935
UniProt:
A0A2S0WUB6
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Position
841989..844886
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AA seq
965 aa
AA seq
DB search
MSTSVSSAFDLDAFGRRHIGTSPSDHALMLAELGYDSLDALMAAAVPTSIRMGEVLDSAI
PAAATEREALAELAALAEQNTVRTSMIGLGYFGTITPSVIQRNVLENPSWYTAYTPYQPE
ISQGRLEALINFQTMVTDLTGLDTANASMLDEGTAVVEGMLLARRASKSTSNRFVVDADV
LPQTLALLESRSVAVGIELVVAELGEQTDVAAFGEHFGLFVQYPGASGRVWNPASVIAAS
KAQGALVVAAADLLALAVITSPGELGADVAVGTSQRFGVPMGFGGPHAGYMAVRGGLERQ
LPGRLVGVSKDAVGAPAYRLTLQAREQHIRREKATSNICTAQVLLAVMASMYAVYHGPRG
IRHIAVSTAAKAAALAEVLTGFGLTLAHEAYFDTLRVHVPGLAGNVVERARQLGVNLWEA
DEATVHVAVDETTTEAELSLVARAFGLPERTEVVVEATSLPAVATGALRRSSGYLEHPVF
NTHHSETQMMRYLKTLADRDYALDRGMIPLGSCTMKLNAATEMQSVTWPEFANLHPFAPE
ADVVGTLGLIEQLESWLAEVTGYDTVSLQPNAGSQGELAGLLAIRGYHLANGDTERTVCL
IPSSAHGTNAASAVLAGMRVVVVATDELGNVDLDDLRARIDEHAANLAALMITYPSTHGV
YEHEVKDITQAVHDAGGQVYVDGANLNALLGFARFGDFGGDVSHLNLHKTFCIPHGGGGP
GVGPVAAKAHLAPHLPGHPMAQRVDHSGGVTHDGGPVSAAPYGSPSILPISWAYVRMMGS
EGLKQATASAVLAANFVASRLRAHFPVLYTGDNGLVAHECILDLRPLTAATGVTVDDVAK
RLVDYGFHAPTMSFPVAGTLMVEPTESEDLAELERFVEAMVAIKAEADAVAAGQWPADDN
PLVNAPHTAESVIAGEWAHPYTREQAVYPVHALVRGKYWVPVRRIDQAYGDRNLVCACPP
VEAFA
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctccgtctcctccgccttcgacctcgacgcgttcggccgccgtcacatcggc
acgagcccgagcgaccacgcgctgatgctcgccgaactcggctacgactccctcgacgcc
ctcatggccgccgcggtgcccacgtcgatccgcatgggggaggtgctggactcggcgatc
cccgctgcagcgaccgagcgcgaggcgctcgccgaactcgccgcgctcgccgagcagaac
accgtgcgcacctcgatgatcggactcggctacttcggcaccatcacgccgtcggtcatc
cagcggaacgtgctcgagaacccgagctggtacaccgcctacacgccgtaccagcccgag
atctcccagggccggctcgaggcgctcatcaacttccagacgatggtcaccgacctcacg
ggcctcgacaccgccaacgcgtcgatgctcgacgagggcaccgcggtcgtcgagggcatg
ctgctcgcccgacgcgcctcgaagtcgacctcgaaccgcttcgtcgtcgacgccgacgtg
ctgccgcagacgctggccctgctcgagtcgcgctccgtcgcggtcggcatcgagctcgtc
gtcgccgagctcggcgagcagacggatgtcgccgccttcggcgagcacttcggcctcttc
gtgcagtacccgggcgcctcggggcgcgtgtggaacccggcatccgtcatcgcggcttcg
aaggcgcagggcgcgctcgtcgtcgccgcggccgacctgctcgccctcgccgtcatcacg
agcccgggcgagctcggcgccgacgtcgccgtcggcacctcgcagcgattcggcgtgccc
atgggcttcggcggaccgcacgccgggtacatggccgtgcgcggaggcctcgagcgccag
ctgcccggacgcctggtcggcgtctcgaaggacgccgtcggcgctcccgcgtaccggctc
accctgcaagcccgcgagcagcacatccgccgcgagaaggcgacgtcgaacatctgcacg
gcgcaggtgctgctcgccgtgatggcgtcgatgtacgccgtgtaccacgggccccgaggc
atccgtcacatcgcggtgtcgaccgcggcgaaggcggccgcgctcgccgaggtgctcacc
ggcttcggcctgacgctcgcgcacgaggcctacttcgacacgctgcgcgtgcacgtgccg
gggctcgccggcaacgtcgtcgagcgtgcccgacagctcggcgtgaacctgtgggaggcc
gacgaggcgaccgtgcacgtcgcggtcgacgagacgacgaccgaagccgagctctcgctc
gtcgcccgggcgttcgggctgcccgagcgcaccgaggtcgtggtcgaggcgacgagcctt
ccggccgtcgcgaccggtgcgctgcggcgctcgagcggctacctcgagcacccggtgttc
aacacgcaccactccgagacgcagatgatgcgctacctgaagacgctcgccgaccgcgac
tacgcactcgaccgcggcatgatcccgctcggctcgtgcacgatgaagctcaacgccgcc
accgagatgcagtcggtgacgtggcccgagttcgcgaacctgcaccccttcgcccccgag
gccgacgtcgtcggcacgctcgggctcatcgagcagctcgagagctggctcgccgaggtg
accggctacgacaccgtgtcgctgcagccgaacgcgggcagccagggcgagctcgcgggc
ctgctcgcgatccgcgggtaccacctcgcgaacggcgacaccgagcgcaccgtgtgcctc
atcccgtcgagcgcgcacggcaccaacgcggcatccgcggtgctcgccggcatgcgcgtc
gtggtggtcgcgaccgacgaactcggcaacgtcgacctcgacgacctccgcgcgaggatc
gacgagcacgccgcgaacctcgccgccctcatgatcacctacccgtcgacgcacggcgtg
tacgagcacgaggtgaaggacatcacccaggccgtgcacgacgccggcggccaggtctac
gtcgacggcgcgaacctcaacgccctgctcggcttcgcccgtttcggcgacttcggtggc
gacgtctcgcacctcaacctgcacaagacgttctgcatcccgcacggcggcggcggcccg
ggcgtcggcccggtcgcggcgaaggcgcacctcgcgccgcacctgccggggcacccgatg
gcgcagcgcgtcgaccactcggggggcgtcacgcacgacggcggccccgtctcggcggcg
ccgtacggcagcccgtcgatcctgccgatctcgtgggcgtacgtgcgcatgatgggatcc
gaaggcctgaagcaggcgaccgcgtcggcggtgctcgcggcgaacttcgtggcctcgcgc
ctgcgcgcgcacttcccggtgctctacacgggcgacaacgggctcgtcgcgcacgagtgc
atcctcgacctgcggccgctcacggcggcgacgggcgtgacggtcgacgacgtggccaag
cgcctcgtcgactacggcttccacgcgccgacgatgtcgttccccgtcgcgggcacgctc
atggtcgagccgaccgagtcggaggatctcgccgagctcgagcgattcgtcgaggcgatg
gtcgccatcaaggccgaagccgacgcggtcgccgccgggcagtggccggccgacgacaac
ccgctcgtgaacgcgccgcacaccgcggagtcggtcatcgcgggggagtgggcccacccc
tacacgcgcgagcaggcggtgtacccggtgcacgcgctcgtgcggggcaagtactgggtg
ccggtgcgccgcatcgaccaggcctacggcgaccgcaatctcgtgtgcgcctgcccgccg
gtcgaggccttcgcgtag
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