Agromyces badenianii: DCE93_04275
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Entry
DCE93_04275 CDS
T05411
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
agm
Agromyces badenianii
Pathway
agm03420
Nucleotide excision repair
agm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
agm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DCE93_04275
03430 Mismatch repair
DCE93_04275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agm03400
]
DCE93_04275
Enzymes [BR:
agm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCE93_04275
DNA repair and recombination proteins [BR:
agm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DCE93_04275
MMR (mismatch excision repair)
Other MMR factors
DCE93_04275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
Motif
Other DBs
NCBI-ProteinID:
AWB94973
UniProt:
A0A2S0WUG2
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All DBs
Position
889974..893252
Genome browser
AA seq
1092 aa
AA seq
DB search
MIAAADIAARLGLHAPTAEQRAVIEADPRGQAIVVAGAGSGKTETMANRVVWLLANSHVA
VPEVLGLTFTRKAAGELAERIRERIAQLVSLGIAEVSLDPLESASVGTYNAFASAIYREH
AMLIGREPDAAVLGEASAWQLARSVVAASADPRLVELDASLDKVTGAVLSISRALAENVA
DSRDVRAMARDFLAMQGLPIEAPRKRTDFTSFVDALGVVEALPPLLELADAYSAAKQQRG
FVEFSDQVALALAICERHPEVVAGHRERYRTVLLDEYQDTSVVQTRLLSALFGEQAVMAV
GDPDQSIYGWRGASAANLARFGRDFAAGGEAVVYDLSTSWRNPEIVLEAANTLIEPLDAG
IPKAPLGASPFAQPGRLDAAWAETIEREAELVAAWFAERLGRGGRGGVHDGAPRSGALLC
RTFANVGVFTAALRARGVPVHVLGMAGLLDQPVIADLVCVLRVLNDPTAGSELVRVLGGA
RWRIGSADLAALHGLAKWLADRDLSTRRLGDEVRAGLRASIAPDESPSIVDALDFLLVAP
DSHSALSAFSEVGLARMRRAGAQLQSLRRRAGLGLVDFVSLVQQELLLDIEVAANAAQPL
GAPSLEAFDELLAGFAEVSEHATLGAFLGWLTEAEQRDRLAPRQDEPEPGAVQVISIHGS
KGLEWDVVAIPRMVDEELPSKPRSSKGWLSFGELPNEFKGDADELPELAWRGSQSQAEFD
RAVSAFAEENKERHAEEERRLAYVALTRTRSDLLLSGSWWASQKAPRKPSPFLRELVTTG
VLDAGVLPAAPESDENPRAGSTERVRWPLDPLGTRRVAVTAAATAVRAAAERPSGEGIGP
VLADRIRLLLEERRRRAEGATSAEVPVRVPASRFKDYVDDPAAVAAQLRRPMPQRPYRAT
RIGTLFHQWVEQRSTGEHEAAAIDALDGLDGLADADARRDETVADATPERLRALQATFEA
SEWGGRKPSAVEIELHLPIGDNVFVCKLDAVYEVEPSSELGRRGIRYQVVDWKTGKAPRD
AHDLELKQTQLALYRLAYANWAGVDPALIDAVFYFVEDDRVIRPDAIYDEAALRRAWASV
AAAGPVPAAASR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgccgcagacatcgccgcacggctcggcctgcacgcgcctaccgcagagcag
cgcgccgtgatcgaggccgacccgcgcgggcaggccatcgtggtggccggtgccggcagc
ggcaagaccgagacgatggccaaccgcgtggtgtggcttctcgcgaactcgcatgtcgcg
gtccccgaggtgctcggactcacattcacccgcaaggccgccggcgagctcgccgagcgc
atccgcgaacgcatcgcccagctcgtctcgctcggcatcgccgaggtctccctcgatccg
ctcgagtccgcctcggtgggcacgtacaacgccttcgcgagcgccatctaccgcgagcac
gccatgctcatcgggcgtgaacccgacgcggccgtgctgggcgaggcatccgcgtggcaa
ctcgcccgctcggtcgtggcggcctcggccgacccgcgtctcgtcgagctcgacgcgtcg
ctcgacaaggtcaccggagccgtgctctcgatcagtcgcgcgctcgccgagaacgtcgcc
gacagccgcgacgtgcgcgcgatggctcgcgacttcctcgccatgcagggcctgccgatc
gaggcgccgcgcaagcgcaccgatttcacgtcgttcgtcgacgcgctcggcgtcgtggaa
gcgctgccgccgctgctcgaactcgccgatgcgtactccgcggccaagcagcagcgcggc
ttcgtcgagttctccgatcaggtcgccctcgccctcgcgatctgcgagcggcaccccgag
gtcgtcgccgggcaccgcgagcgctaccgcaccgtgctcctcgacgagtaccaagacacg
agtgtcgtgcagacccggctgctctccgccctgttcggcgagcaggcggtcatggcggtc
ggcgaccccgaccagtcgatctacggatggcgcggggcgagcgccgcgaacctcgcccgg
ttcggccgtgacttcgcggccggcggtgaggccgttgtctacgatctctccacgagctgg
cgcaatcccgagatcgtgctcgaggcggcgaacaccctcatcgagccgctcgacgccggc
atcccgaaagcgccgctcggcgcgtcgccgttcgcgcagccgggccggttggatgccgca
tgggcggagaccatcgaacgcgaggccgaactcgtggcggcgtggttcgccgagcgactc
ggtcgaggcgggcgaggcggggtgcacgacggcgcgccgcgcagtggggcgctgctctgc
cgcaccttcgccaacgtcggggtcttcacggcggcgctccgggcacgcggcgtgccggtg
cacgtgctcggcatggccgggctcctcgatcagcccgtgatcgccgacctcgtgtgcgtg
ctgcgggtgctgaacgaccccaccgcgggctccgaactcgtgagggtgctgggcggcgcg
cgctggcgcatcgggtcggccgatctcgccgcgctgcacgggctggccaaatggcttgcc
gaccgcgacctgtcgacgaggcgtctcggcgacgaggtgcgggcggggctgcgcgcctcg
atcgctcccgacgagtcgccgtcgatcgtcgacgccctcgatttcctcctcgtcgccccc
gactcgcattcggcgctgtcggccttcagcgaggtcggcctcgcccgcatgcgacgcgcc
ggggcgcaactccagtcactgcgacgccgtgcagggctcggcctggtcgatttcgtcagc
ctcgtgcagcaggagctgctgctcgacatcgaggtcgcggcgaatgccgcgcagccgctc
ggggcgccgagtctcgaggcgttcgacgaactcctcgccggcttcgccgaggtctcggag
cacgcgaccctcggcgcgttcctcggctggctcaccgaggccgaacagcgcgaccggctc
gcgccccgccaagacgagcccgagcccggggcggtgcaggtgatctcgatccacgggtcg
aagggcctcgagtgggacgtcgtggcgattccgcgcatggtcgacgaagagctgccgtcg
aagccccgttcgtcgaagggctggctctcgttcggcgaactgcccaacgagttcaagggc
gacgccgacgagctgcccgagctggcctggcgcggctcgcagagccaagccgagttcgat
cgcgcggtgagtgcgttcgccgaagagaacaaagagcgccacgccgaagaggagcggcgc
ctcgcctacgtggcgctcacccgcacacgcagtgacctgctcctgtcgggttcgtggtgg
gcgagccagaaggccccgcgcaagccgagcccgttcctgcgcgaactcgtgacgacgggt
gtgctcgatgcgggcgtgcttccggcggctcctgaatccgacgagaacccgagggcgggt
tcgaccgaacgcgtgcggtggcccctcgatccgctcggcacgcgtcgggtcgccgtgacc
gccgcggcgaccgcggtgcgcgccgccgccgagcgaccgagcggtgagggcatcggcccg
gtgctcgccgatcgcatcaggctgctcctcgaagagcgccgccgccgcgccgagggcgcc
acgagtgccgaggtgcccgtgcgcgtgcccgcctcccgcttcaaggactacgtcgacgac
cccgcggccgtcgccgcgcagctgcggcggccgatgccgcaacggccgtaccgggcgacc
cgcatcggcacgctgttccaccagtgggtcgagcaacgctcgaccggcgagcacgaagcc
gccgcgatcgatgcactcgatggactcgacggtcttgctgatgcagacgctcggcgagac
gagaccgtggccgatgccacgcccgagcggctccgcgcgctgcaggccacgttcgaggca
tccgagtggggcgggcgcaagccctcagccgtcgagatcgagctgcacctgccgatcggc
gacaacgtcttcgtgtgcaagctcgatgcggtctacgaggtcgagccgtcgagcgagctc
gggcggcgcggcatccgctaccaggtcgtcgactggaagacgggcaaggcgccgagagac
gcgcacgacctcgagctgaagcagacgcagctcgcgctctaccggctcgcctatgccaac
tgggccggcgtcgacccggcgctcatcgacgccgtcttctacttcgtcgaagacgaccgg
gtgatccgccccgacgcgatctacgacgaagcggcgttgcgccgagcgtgggcatcggtc
gcggcagccggcccggtgccggcggcggcatcgcgctga
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