Agromyces badenianii: DCE93_04755
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Entry
DCE93_04755 CDS
T05411
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
agm
Agromyces badenianii
Pathway
agm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCE93_04755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agm03021
]
DCE93_04755
03019 Messenger RNA biogenesis [BR:
agm03019
]
DCE93_04755
Transcription machinery [BR:
agm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DCE93_04755
Messenger RNA biogenesis [BR:
agm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DCE93_04755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
SAP
Spore_III_AA
AAA_25
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
AWB95053
UniProt:
A0A2S0WUP4
LinkDB
All DBs
Position
995741..997927
Genome browser
AA seq
728 aa
AA seq
DB search
MTNGTDHADRVANTARLSSMKVAELQELAASLGLGGGSKRRKGELVELISAHQEGAAGAE
PTAPVEEIAADTVPPEATARVELDVPGLTEPRIERDAPAEAAPVAPEAAADAAPTADAPA
DAPAARQRRQPRRATSATTAAVQHVNGGGAGVGLVPETDDAREAARAAVREELAAATGEG
ARGAQSGDGDGESPAAEEPRQGRSRNRGRRGGERGDRGERGDDAQKAEQQKQGERQPGRQ
NGDRQNGDRQNAEQQGAKAGEPRQGGEADKAKQNDGGRGRDTQARDSQARDAQARDNQAR
DAQAQLEGEGGRRNRYRDRKRRGQGVGDELEPEILDDDVLIPIAGILDVLDNYAFVRTTG
YLPGPSDVYVSLGQVKKYNLRKGDAVVGAIKQPRDGDSNSRQKYNALVKVDSINGQTADE
AAARVEFQSLTPLYPQERLRLETEPTKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQ
QIANAISINNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIER
AKRLVELGHDVVVLLDSITRLGRAYNLAAPASGRILSGGVDASALYPPKRFFGAARNIEN
GGSLTILATALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREE
MLLSADEVKITWKLRRALAGLEQQQALEAVLGRLKETQSNVEFLMLMQKSMPVAAGHGNS
HGHETDHR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacggaaccgaccacgccgaccgcgtggccaacaccgcccgcctgtcctccatg
aaggtcgccgagctccaagagctcgccgcatccctcggcctcgggggcggatcgaagcgc
cgaaaaggagagctcgtggagttgatctccgcccaccaggaaggggccgccggcgcagag
ccgaccgcaccggtcgaggagatcgcagccgacaccgtgccgcctgaggcgaccgcgcgg
gtcgaactcgacgtgcccgggctgaccgagccgcgcatcgagcgcgacgctccggccgag
gccgcgcctgtcgcgccggaggccgcggccgacgccgcgcctacggccgacgccccggca
gacgctcccgccgcccgtcagcggcgccagccccgtcgcgccacgagcgcgaccaccgct
gcggtgcagcacgtcaacggcggcggtgccggcgtcggcctcgttcccgagaccgacgac
gcccgcgaggcggcccgcgccgccgtgcgcgaggagctcgctgccgcgaccggcgagggc
gcccgcggcgcccagtcgggcgatggcgatggcgagagccccgctgcagaggagccccgc
cagggtcgcagccgcaaccgcggtcgacgcggaggcgagcgcggagaccgcggcgaacgc
ggcgacgacgcgcagaaggccgaacagcagaagcagggcgagcgccagcccggccggcag
aacggcgaccgccagaacggcgaccgtcagaacgccgagcagcagggcgcgaaggccggc
gagccccgtcagggcggcgaggccgacaaggcgaagcagaacgatggcggccgcggccgt
gacacgcaggcccgtgattctcaggcccgcgacgcgcaggcccgcgacaaccaggcccgc
gacgcgcaggcccagctcgagggcgagggcgggcgtcgcaaccgctaccgcgaccgcaag
cgtcgtggccagggtgtcggtgacgagctcgagcccgagatcctcgatgacgacgtgctg
atcccgatcgcgggcatcctcgacgtgctcgacaactacgcgttcgtgcgcaccaccggc
tacctgcccggcccgagcgacgtgtacgtctccctcggccaggtgaagaagtacaacctg
cgcaagggcgatgccgtcgtcggcgcgatcaagcagccgcgtgacggcgattcgaacagc
cgccagaagtacaacgcgctcgtgaaggtcgactcgatcaacggccagaccgccgacgag
gccgccgcacgcgtcgagttccagagcctgacgccgctctacccgcaggagcgcctgcgg
ctcgagaccgagcccaccaagctaacgcagcgcatcatcgacctcgtcgctcccatcggc
aagggccagcgcggcctcatcgtcgcgccgccgaaggccggcaagacgatcgtgctgcag
cagatcgcgaacgccatctcgatcaacaaccccgaggtccacctcatggtcgtgctcgtc
gacgagcgccccgaagaggtcaccgacatgcagcgcacggtgaagggcgaggtcatcgcc
tcgaccttcgaccgcccggccgaagaccacacgacggtcgccgagctcgccatcgagcgc
gcgaagcgcctcgtcgagctcggccacgacgtcgtcgtgctgctcgactcgatcacccgc
ctgggccgtgcgtacaacctcgcggcaccggcatccggtcgtattctctccggtggcgtc
gacgcgtctgcgctgtacccgccgaagcgcttcttcggcgcagcgcgcaacatcgagaac
ggcggctcgctcaccattctcgcgactgcgctcgtcgagaccggctcgaagatggacgag
gtgatcttcgaggagttcaagggcaccggcaactccgagctgcgcctctcgcgtcagctc
gccgacaagcggatcttcccggcggtcgacgtcaacgcgtcgtccacgcgccgcgaagag
atgctgctctcggccgacgaggtgaagatcacctggaagctgcgtcgcgccctcgccggt
ctcgagcagcagcaggcgctcgaagccgtgctcggccggttgaaagagacgcagtcgaac
gtcgagttcctcatgctcatgcagaagtcgatgccggtcgcggccgggcacggcaactcg
cacgggcacgagaccgaccaccgctga
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