Agromyces badenianii: DCE93_04915
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Entry
DCE93_04915 CDS
T05411
Name
(GenBank) fibronectin type III domain-containing protein
KO
K20276
large repetitive protein
Organism
agm
Agromyces badenianii
Pathway
agm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
agm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DCE93_04915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Motif
Other DBs
NCBI-ProteinID:
AWB95081
UniProt:
A0A2S0WUV8
LinkDB
All DBs
Position
1026706..1032594
Genome browser
AA seq
1962 aa
AA seq
DB search
MVNGPALSRLSRPRSAIITAAATTAVVVLVAGVAIASGGYAAQRVDLGDAAVWVGSNDHQ
SIGRANTAVLELNSVVETGSTDAEIVQQGATVLALDAARATAGIIDATTSTLTDSVAVPP
DDAELSLAGTRVIIASGGDVWSAPVAQFAQFDVGTEPMLAFGAGSVTSVDPDGTLFAYTP
STGDIARVDAAEAETVAARWQIEPVVGEPEVQITSVGDGWAVLDVDTGRLHLERGAVDLS
SLIEPSDSPVLQRASSAGDEVAIATRQGLVTVGLDGEAPRVRVEGRSGLPAAPVVHNGCL
HAAWGSGTAWRSCTAGDRAPGDLSTAPTTGDYVFVANGGSIVLNERTSGKSWAAADEYGL
IDNWDELLEIERDEETVEQNDPETQPTVEKSQVPPVAVDDEFGARPGRTTTLPVLLNDYD
ANGDVIVVDAVDGDLPAGVDLDLVADDQQLQLKLDNEASGVIAVGYTIDDGFGGTARATV
RVTVREADENSPPVQHRPTRAFVEAGGRVTTPVLADWVDPDGDPFFLQQGTAGEPDSLSS
TADGVVVFDEKGGAGAERTVSLEVSDGRDLAVGTLGIGVRAPGDVPLVADPFVVLATAGQ
EIRVEPLRHVRGGSGRIQLSAVPAKPDTQLTPDFDGGTFRFTSAAVGTHYLEYTVTDGAH
TTTGRVRVDVSAPPERDTTPITVPHTAFVRLTQSVDVDVLATDIDPTGGVLILTGLGEPA
AEAGVQVEVVEHRILRVTLTQPLDSGSTVFGYRVSNGLAEAQGEVTLVEMQEPERKQPPV
AVPDTVSARTGDVVDIPVLANDEHPDAFPITLDPALEREPDAGLLFVDGDRLRFFAPDTA
GEFEAVYRINGPDMQSATATVRISVRAADPETNSSPVPATVTARGLAGETVRIPIPLGGA
DPDGDSVQLLGQESNPERGSVTSRGADWLEYEAGEYSAGTDEFQYEVVDALGARATGTVR
VGIAPRLDGARAPIAVGDSVNVRPGRTISVRVLENDSDPDGGALTLQSVEVNTGDATAEI
VDDRLEIELPPGEHEYSFTYTIENEQLGSASAFVKIVASDDAPLARPEASDTVLTLSDIL
GEDHIDVPVLRKVFLADGDESDLLVGLVDGYDRGATVREDGSIRVKVEDRRRVIPFSVAH
PEDPAIVAYAFIWVPGRDDALPQLRSDAPAVRVVSGEAVTIELEEFVIAASGRPVKITDA
ATVRASHSDGTELVVDQDTLRYRSEEGYFGPASLSFTVTDGESAADPSGRTGTIVIPIVV
QPTENQPPAFTGGVIDFEPGQSKTIDLLKLTNYPYADARKELVYRLLPPPVEGFRFTLDG
DELTIRAEESTAKGNRGAVAVGVSDGAGDGKPGRIELRVVPSTKPIAQPVADSAVAARGR
TTSIDVLANDGATNPFPDVPLRVVDVRGLDSDSLPDGVSIVPSDDRSTLNVTVAAGAAPV
NSSVQYQVADATDDPSRYAWGTATISVQDRPDPVTGVQVTGFGDETLDVVFGAGAFNNSP
ITGYEIALVDASTRDVLRSSDCAATTCTVPTSGNGQSNAVFLRVQARNGIGLSDPVEAPG
PIWSDVIPPPPGGLRALPRDGRLLIEWTPVSTGAGSAVGSYVVTVAGVSNEVSAGAACTA
TLCSTESQPLENGSQVPITVSARNQAYPALAVWTEAGGSGTPFGPPVAGGISVNGDATAG
TVTVSWEPFAANGDAIGGYYVQRLVDGATSVPSGAQACSVTTPAPGSVVAPSGGGSVAEV
VQVGPETTSVQFAGTAAESTRYSFLVWGFNRAACVNTEVAGTVVRPAPGSVQSVDSRMLF
RTTELYDRYIDGVSPGAWRYNIVAVDHNGAQIPGTLRSFGGSGWAQDLFARPYGESVRFQ
VQACSVWGSCGPWSAVLPSDSRPSLTFALPSRVWDGASKQWSWTAAPSNSGLPAAFRCGV
DGNPGGRTAQTETSCQVPEASPDDRVWLDVEIAGIVVRYENR
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacggtcccgcactctcgcgcctgtctcggccacgatccgcgatcatcacggcg
gcagcgacgaccgcggtcgtcgtgctcgtcgcgggggtcgccatcgcctccggtggatac
gccgcacagcgggtcgacctgggcgacgccgccgtctgggtgggcagcaatgatcatcag
tcgatcggacgtgcgaacacggcggtgctcgagctgaactcggtcgtcgaaaccggctcc
accgacgcggagatcgtgcaacagggggccaccgtgctcgcgctcgatgcggcgagggcg
acggccggaatcatcgatgcgaccacctcgaccctcaccgacagcgtggccgttcctccc
gacgacgcagagctctccctcgccggcacgcgcgtgatcatcgcctccggcggcgacgtg
tggtcggcgcccgtcgcgcaattcgcgcagttcgacgtcggcaccgagccgatgctggcc
ttcggcgccggatccgtgacctcggtcgatcccgacggcacgctcttcgcctacacgccg
tcgacgggtgatatcgcgcgggtcgacgcagccgaggcagagaccgtggccgcccggtgg
cagatcgaaccggtcgtcggcgagcccgaagtgcagatcacctcggtcggcgacggttgg
gcggtgctcgacgtcgacaccggccggctccacctcgagcgaggagcggtcgatctcagc
tcgctgatcgagccgagtgacagcccggtgctccagagggcttcgagcgccggcgacgag
gtcgcgatcgcgacccgccagggactcgtcaccgtcggactcgacggagaggcgccgcgc
gtacgggtggaggggcgctccggcctgcccgccgctcccgtggtgcacaacggctgcctg
cacgccgcttgggggtcgggtacggcatggcgctcctgcaccgccggcgatcgagcaccg
ggcgacctatcgacggccccgaccacgggcgactacgtcttcgtggcgaacggcggctcg
atcgtgctgaatgagcgcacgagcggaaaatcctgggccgccgccgacgagtacggcctc
atcgacaattgggatgaactcctcgagatcgagcgcgacgaggagaccgtcgagcagaac
gaccccgaaacgcagccgacggtcgagaagagccaggtgccgcccgtggccgtcgacgac
gagttcggcgcccgtcccggtcgcacgacgaccctgccggtgctgctgaacgactacgac
gccaatggcgatgtcatcgtcgtcgacgcggtcgacggagacctccccgccggcgtcgac
ctcgacctcgtcgccgacgatcagcagctgcagctgaagctcgacaacgaggcatccggg
gtcatcgcggtcggctacacgatcgatgacggattcggcggcaccgcgcgagcgacggtg
cgtgtgaccgtgcgcgaggccgacgagaattcacccccggtgcaacaccgccccacgagg
gcgttcgtcgaggccggtggccgggtgacgaccccggtgctcgccgactgggtcgacccc
gacggcgatccgttcttcctgcagcagggcactgccggcgagccggattccctctcatcg
accgccgacggcgtcgtcgtcttcgacgagaagggcggcgccggtgcggagcgcacggtc
tcgctcgaggtctccgacggacgcgacctcgccgtcggcacgctcggcatcggcgtgcgc
gcgcccggcgatgttcccctcgtggccgatccgttcgtcgtgctcgcgaccgccggccag
gagatccgtgtcgaaccgctacggcacgtgcgaggcggctccggtcgaatccagctgagc
gcggtgccggccaagcccgacacccagctcacacctgacttcgacggcggcaccttcaga
ttcacgagtgccgcggtgggcacccactacctcgagtacaccgtgaccgacggcgcccac
acgacgaccggacgcgtgcgggtcgacgtctccgctccgcccgagcgcgacacgaccccg
atcacggtgccgcacacggccttcgtccgattgacgcagtcggtcgacgtcgacgtgctc
gcgaccgacatcgacccgacgggcggagtgctcatcctcaccggactcggcgaacccgcc
gcagaagccggtgtgcaggtcgaggtcgtcgagcatcgcatccttcgggtgacgctgacg
caacccctcgactcgggttcgaccgtgttcgggtaccgcgtgagcaacggcctcgccgaa
gcccagggcgaggtgaccctcgtggagatgcaggaacccgagcgcaagcagccgcccgtc
gccgtgcccgacaccgtctccgcgcgcaccggagacgtcgtcgacatcccggtgctcgcc
aatgacgagcatcccgacgcgttcccgatcaccctcgaccccgctctcgagcgcgagccc
gatgccgggctgctcttcgtcgacggcgatcgtctccgcttcttcgcgcccgacacggcg
ggggagttcgaagcggtctaccgcatcaacgggcccgacatgcagtccgcgacggccacg
gtgcgcatctcggtgcgtgcggccgatcccgagacgaacagctcgccggtgccggcgacc
gtgacggcgagagggctggccggcgagaccgtgcgcatcccgatcccgctcggtggggcc
gaccccgacggcgacagcgtgcagttgctcgggcaggaatcgaatcccgagcgcggcagc
gtcacctcgcgcggcgccgactggctcgagtacgaggcaggcgagtactcggcgggcacc
gacgagttccaatacgaggtcgtcgacgcgctcggagcgcgcgcgaccggcacggtgcgg
gtgggcatcgcgccgcggctcgacggggccagggcgcccatcgccgtcggcgactccgtg
aacgtacgccccggacgcacgatctcggttcgagtcctcgagaacgattcggatcccgac
ggcggtgccctcaccttgcagagcgtcgaagtgaacacgggcgacgcgacggcggagatc
gtcgacgatcgactcgagatcgagctccccccgggtgagcacgagtacagcttcacctac
acgatcgagaacgagcagctcggctcagcctcggccttcgtcaagatcgtggcgagcgac
gacgcgcccctcgcccgccccgaagcctccgataccgtcctgaccctgagcgacatcctc
ggcgaagaccacatcgacgtgccggtgctgcgcaaggtcttcctggccgacggcgacgag
tccgacctcctcgtcggtctcgtcgacggctacgaccgaggcgcgacggtgcgcgaagac
ggcagcatccgcgtgaaggtcgaagaccgccggcgcgtgatccccttctccgtcgcgcat
cccgaagaccccgccatcgtcgcctacgccttcatctgggtgcccggccgcgacgatgcg
ctgccgcaattgcgctccgatgccccggccgtgcgcgtcgtgagcggcgaggcggtcacg
atcgaactcgaggagttcgtcatcgccgcatcgggccggccggtcaagatcacggatgcc
gcgaccgtgcgtgcctcgcacagcgacgggacggaactggtcgtcgaccaggacacgctc
cggtaccgcagcgaagaggggtacttcggtccggcttccctctcgttcaccgtcaccgac
ggcgagtcggcagcggatccgtcggggcgcaccgggaccatcgtcatccccatcgtggtg
cagccgaccgagaaccagcctccggctttcacgggcggagtcatcgacttcgaaccgggc
cagtcgaagacgatcgatctcctgaaactcacgaactatccctacgcggatgctcgcaag
gagctcgtgtaccgactgctcccgccgccggtcgaggggttccgattcacgctcgacggc
gacgagctcacgatccgggccgaggagtccacggccaagggcaaccggggtgccgtcgca
gtcggggtgtccgacggcgccggcgacggcaagcccgggcgcatcgagctgcgggtcgtg
ccgtcgacgaagccgatcgcccagcccgtcgcagacagcgcggtcgctgcgcggggccgc
acgacctcgatcgacgtgctcgcgaacgacggggccacgaacccgttccccgacgtgccg
ctccgggtcgtcgacgtgcgcggactcgactccgacagcctccccgacggcgtctcgatc
gtgccgagtgacgaccgttcgaccctgaacgtgaccgtcgccgccggagcagctccggtc
aactcatcagtgcagtaccaagtggccgatgccaccgacgaccccagccggtatgcgtgg
ggaaccgccacgatctccgtgcaggaccggcccgatcccgtcactggcgtgcaggtgacc
gggttcggcgacgagaccctcgatgtcgtcttcggcgccggggcgttcaacaactcgccc
atcaccggctatgagatcgcgctcgtcgacgcgagcacccgtgacgtgctgcgttcgtcg
gattgcgcggcgaccacgtgcacggttccgacttccggcaacggccaatcgaacgcggtc
ttcctgcgggtgcaggcgcgcaacgggatcggactctccgacccggtcgaggcgcctggc
ccgatctggtcggacgtcatcccgcctccgccaggcggcctgcgtgcgctgccgcgcgac
ggccggctgctcatcgagtggacgccggtgtcgacgggtgccggcagcgccgtcggctcc
tacgtggtcacggtcgccggcgtctcgaacgaggtgtcggcgggtgcggcgtgcacggcg
acgctctgctcgaccgagtcgcagccgctcgagaacggcagccaggtgccgatcacggtc
agcgcccgcaaccaggcgtacccggcgctcgcggtctggaccgaggccggcggctcaggc
acgccgttcggtccaccggtcgccggcggcatctcggtcaacggcgacgcgacggccggc
acggtcaccgtctcctgggagccgttcgcggcgaacggcgacgcgatcggcgggtactac
gtgcagcgtctcgtcgacggtgcgaccagtgttccgagcggcgcccaggcgtgctcggtg
accaccccggcgccaggctcggtcgtggcgccgtcgggcggcggcagcgtcgccgaggtc
gtgcaggtcggccctgagacgacgagcgtccagttcgcgggcaccgcggccgagtccacg
cgctactcgttcctcgtctgggggttcaaccgtgccgcgtgcgtgaacaccgaagtcgcc
ggcaccgtcgtgcgcccggcgcccgggagcgtccagagcgttgacagtcgtatgctcttc
cgcaccaccgagctctacgaccggtacatcgacggtgtgtcgccgggggcatggcggtac
aacatcgtggccgtcgaccacaacggcgcacagatccccggcaccctccgcagcttcggc
ggatcgggatgggctcaggatctcttcgcacgtccatatggggaatcggtgcgattccag
gtgcaggcgtgctcggtctggggcagttgcgggccgtggtcggccgtgctgccgtccgac
tcgagaccctcactcaccttcgcactgccgagccgtgtctgggacggcgcctcgaagcag
tggtcgtggaccgcggcaccgtcgaactccggcctgcccgcggcgttccggtgcggcgtc
gacggcaaccccggcgggcgcaccgcgcagaccgagaccagctgccaggtccccgaagcc
agccccgatgaccgggtctggttggatgttgagatcgcgggcatcgtcgtccgctatgag
aaccgctga
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