Agromyces badenianii: DCE93_05310
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Entry
DCE93_05310 CDS
T05411
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
agm
Agromyces badenianii
Pathway
agm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
agm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DCE93_05310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
agm03000
]
DCE93_05310
03400 DNA repair and recombination proteins [BR:
agm03400
]
DCE93_05310
Enzymes [BR:
agm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DCE93_05310
Transcription factors [BR:
agm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DCE93_05310
DNA repair and recombination proteins [BR:
agm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DCE93_05310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
AWB95146
UniProt:
A0A2S0WUX6
LinkDB
All DBs
Position
complement(1119069..1120655)
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AA seq
528 aa
AA seq
DB search
MTTTASTRRRPSDPLDDPEFAERYRAMQARDARFDGQFITGVHSTGIYCRPSCPAVAPKP
GNVSFYLTAAAAHEAGLRACKRCLPDAVPGSPQWDLRDDLAARAMRLIADGVVEREGVPG
LAARLGYTPRHLTRVLTAELGAGPLALARAHRAQTARALLTSTGLPAADVAFASGFGSIR
QFNDTIREVYERSPLELRAAARVRERERGPSRASAAPTSSLPDVPDVPDAPAVGGVVRLR
LPARPPFDAAGVFAWLAARALDGVERAGDDRYERTLRLPGGTAVVAFAATGDAAAPAIDV
EARLATLADLPPLVARVRRLFDLDADAVAIDAVLARDPALAASVAETPGIRVPGCLDPHE
LVFRALVGQQVSVKAARTSLARLAAELGERVVPHDDGAPSVLFPSAAAIAEHGRAVLKGP
VARVRTILDVAARLETGALVVAAERERHELQAELLAVPGIGPWTAGYVAMRVTRAPDVLL
TGDLALRNGAERLALPSTATELAHRGGRWAPWRSYASMHLWRAAGTKV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccgcgagcacccgtcgacgaccgagcgatccgctcgacgaccccgagttc
gccgagcgttaccgggcgatgcaggctcgagacgcccgcttcgacggccagttcatcacg
ggcgtccactccaccggcatctactgccgcccgagttgcccggcggtcgcgccgaagccc
ggcaacgtcagcttctacctcacggccgccgccgcgcacgaggccggactccgggcgtgc
aagcgctgcctgcccgacgccgtgccgggctcgccgcagtgggacctgcgcgacgacctc
gccgcccgggcgatgcgactcatcgccgacggcgtcgtcgagcgcgagggcgtgcccggg
ctcgcggcacgtctcggctacacgccgcgtcacctcacgcgtgtgctcacggccgaactc
ggcgcaggtccgctcgccctggcccgcgcgcatcgcgcccagacggcgagggcgctgctc
acctcgaccgggctgccggcggccgacgtggcattcgcctcgggtttcggcagcatccga
cagttcaacgacacgatccgcgaggtctacgagcgcagcccgctcgagttgcgggccgca
gcccgggtgcgcgagcgcgagcggggtccgtcgcgtgcgtccgcggcgccgacctcgagc
ctgcccgacgttcccgacgttcccgacgcccctgccgtgggcggagtcgtgcgcttgcgc
ctgcccgcgcggccgccgttcgatgccgcgggcgtcttcgcctggctcgcagcccgcgcc
ctcgacggtgtcgagcgggccggcgacgaccgctacgagcgcacgctgcggctgcccggc
ggaacggccgtcgtcgccttcgccgccacaggcgatgccgcggcgcccgccatcgacgtc
gaggcccgcctcgccaccctcgccgacctgcccccgctcgtggcgcgcgttcggcggctc
ttcgacctcgacgccgatgcggtcgccatcgacgccgtgctcgcccgcgacccggcgctc
gcggcatccgtcgccgagactccgggcatccgggtgccaggatgcctcgatccgcacgaa
ctcgtgttccgcgcgctcgtcgggcagcaggtgtcggtgaaggcggcacgcacctcgctc
gcacggctcgcggccgagctcggcgagcgcgtcgtgccgcacgacgacggcgcaccgtcg
gtgctcttcccgtcggcggcggcgatcgcagagcatggtcgcgcggtgctgaaggggccc
gtggcgcgcgtgcgcaccatcctcgacgtcgctgcccggctcgagacgggcgccctcgtc
gtcgcggccgagcgcgagcgccacgagttgcaggccgagctcctcgccgtgcccggcatc
ggcccgtggacggccgggtatgtcgcgatgcgggtgaccagggcgcccgacgtgctgctc
acgggcgatctggcgctccgcaacggcgctgagcggctggcgctgccgtcgaccgcgacc
gagctcgcgcaccgaggcgggcggtgggcgccctggcgcagctacgcctcgatgcatctc
tggcgcgccgccggcacgaaggtctga
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