KEGG   Agromyces badenianii: DCE93_07955
Entry
DCE93_07955       CDS       T05411                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
agm  Agromyces badenianii
Pathway
agm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:agm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    DCE93_07955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:agm03400]
    DCE93_07955
DNA repair and recombination proteins [BR:agm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DCE93_07955
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      DCE93_07955
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_29 AAA_21 nSTAND1 AAA_16 RsgA_GTPase APS_kinase DnaJ_CXXCXGXG AAA_25
Other DBs
NCBI-ProteinID: AWB95604
UniProt: A0A2S0WWN1
LinkDB
Position
complement(1669008..1671899)
AA seq 963 aa
MPVSRLDAHSHLSVRGARVHNLQNVDVEIPRDAMVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIYDYMRLLW
ARIGVPHCPVCGERIQRQTVQQIADQLMELPEGTRYQVVSPVVSKKKGEFVDLFRDLAAQ
GYSRAVVDGDVIRLDEPPKLKKQVKHDISVVIDRLVAGPELLGRLTDSLETALRLTDGLV
QVNYVDETGPAAWATFSEKLSCPNQHPIQLTEIEPRTFSFNAPFGACPECSGLGTRMSVD
DSLLLGDQSLSIAEGVILPWTSQGKSLYNYYEKLLGGLARDLDFSLDTPWEELDDVARQA
VLRGDNFEVKVKWRNRYGREMSYTSGFEGVVPYIERQYLQAETDVQRARWSEYLREVPCP
VCDGKRLKPEVLSVLIHDASIADVGLLSLTDARAFMDRLELTDREQAIAAQVLREIKLRL
DFLIRVGLSYLDLSRAAATLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRL
IDTLIALRDLGNTLIVVEHDEDTIRTADWIVDIGPGAGVNGGTVVHSGSYADLVKNTRSL
TGDYLSGRKEIAMPEQRRRIDPERTIVVQGAEANNLRGVDVEFPLGVLTAVTGVSGSGKS
SLVNDILYRVLANRLNGARKVPGKHRRVTGLDQLDKVVHVDQAPIGRTPRSNPATYTGVF
DRIRNLFSETTEAKARGYLPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVACEVCGG
QRYNRETLQVHYKGKNIAEVLEMPISEAAEFFEPISAIHRYLKTLVDVGLGYVQLGQSAT
TLSGGEAQRVKLATELQRRSNGRSVYVLDEPTTGLHFEDVQKLLKVLGKLVDKGNTVIVI
EHSLDVIKSADWVIDLGPEGGSGGGQIVATGTPEEVAAVSESHTGYFLRDILDAASTRAA
VAS
NT seq 2892 nt   +upstreamnt  +downstreamnt
gtgccagtttcacgtctcgatgcccattcgcacctgagtgttcgcggtgcccgcgtgcac
aacctgcagaacgtcgacgtcgagattccgcgcgacgcgatggtcgtgttcacgggtctg
tcgggctccggcaagtcatcgctcgccttcgatacgatcttcgccgaggggcagcgacgg
tacgtcgagtcgctctcggcctacgcccggcagttcctcggccaggtcgaccgacccgac
gtcgacttcatcgaggggctgagcccggcggtgtcgatcgaccagaagtccaccaaccgc
aacccgcgctcgaccgtcggcacgatcaccgagatctacgactacatgcgcctgctctgg
gcgcgcatcggcgtgccgcactgcccggtgtgcggcgagcgcatccagcgccagacggtg
cagcagatcgccgaccagctcatggagctgcccgagggcactcgctaccaagtggtgagc
ccggtcgtgtcgaagaagaagggcgagttcgtcgacctcttccgcgatctcgccgcgcag
gggtactcgcgggcggtcgtcgacggcgacgtcatccggctcgacgaaccgccgaagctg
aagaagcaggtcaagcacgacatctcggtcgtcatcgaccggctcgtcgccggccccgaa
ctgctcgggcgcctcaccgactccctcgagacggcgctgcgcctgaccgatgggctcgtg
caggtcaactatgtcgacgagaccggcccggccgcgtgggcgaccttctccgagaagctc
tcgtgcccgaaccagcacccgatccagctcaccgagatcgagccgcgaaccttctcgttc
aacgcgccgttcggagcctgtcccgagtgctcgggcctcggcacccgcatgtcggtcgac
gattcgctgctgctcggcgatcagagtctcagcatcgccgaaggcgtgatcctgccgtgg
acgtcgcagggcaagagcctctacaactactacgagaagctcctcggcggcctcgcccgc
gacctcgacttctcgctcgacaccccgtgggaggagctcgacgacgtcgcccgacaggcg
gtgcttcgcggcgacaacttcgaggtcaaggtgaaatggcgcaaccggtacggccgcgag
atgagctacacctcgggcttcgagggcgtggtgccctacatcgagcgccagtacctccag
gccgagaccgatgtgcagcgggcccgctggtcggagtacctgcgcgaggtgccgtgcccg
gtctgcgacggcaagcggctgaagcccgaggtgctctcggtgctcatccacgacgcgagc
atcgccgatgtcgggctcctgagcctcaccgacgcccgcgcattcatggaccggctcgaa
ctgaccgatcgcgagcaggcgatcgcggcgcaggtgctgcgagagatcaagctgcgcctc
gacttcctgatccgcgtcggcctcagctatctcgatctgtcgcgggcagcggccactctc
tccgggggagaagcgcagcgcatccgactcgccacccagatcggctcggggctcaccggc
gtgctctacgtgctcgacgagccgagcatcggcctgcaccagcgcgacaatcgacgcctc
atcgacacgcttatcgcgctgcgcgatctcggcaacaccctgatcgtcgtcgagcacgac
gaagacaccatccgcaccgccgactggatcgtcgacatcggcccgggcgcgggggtcaac
ggcggcaccgtcgtgcactccggcagctatgccgacctcgtgaagaacacgcgctccctc
accggcgactatctctcgggccgcaaagagatcgcgatgcccgagcagcggcgccgcatc
gatcccgaacgcacaatcgtcgtgcagggtgcagaggccaacaacctgcgcggcgtcgac
gtcgagttccccctcggcgtgctgaccgcagtgaccggcgtcagcgggtcgggcaagtcg
tcgctcgtcaacgacatcctctatcgggtgctcgcgaaccgcctcaacggtgcgcgcaag
gtgccgggcaagcatcgccgggtcacgggactcgatcagctcgacaaggtcgtgcacgtc
gaccaggcgccgatcgggcgcaccccccgttcgaatcccgccacgtacacgggcgtcttc
gatcgcatccgcaacctcttctccgagacgaccgaggcgaaggcccgcggctacctgccc
ggtcgcttcagcttcaacgtcaagggcgggcgctgcgaggcatgctccggcgacggcacg
atcaagatcgagatgaacttcctgcccgacgtctacgtcgcgtgcgaggtctgcggcggc
cagcggtacaaccgcgagaccctgcaggtgcactacaagggcaagaacatcgccgaggtg
ctcgagatgccgatcagcgaggcggccgagttcttcgaaccgatctcggccatccaccgg
tacctcaagacactcgtcgacgtcggactcggctacgtgcagctcggccagagcgccacg
accctgtcgggtggcgaggcgcagcgggtgaagctcgcgaccgagctgcaacggcgctcg
aacggccgcagcgtctacgtgctcgacgagcccacgaccggcctgcacttcgaagacgtg
cagaagctgctcaaggtgctcggcaagctcgtcgacaagggcaacacggtcatcgtgatc
gagcacagcctcgacgtcatcaagtcggccgactgggtcatcgacctcgggcccgaaggc
ggctcgggcggcggccagatcgtggcgacgggcacgcccgaagaggtcgccgcggtgtcc
gagagccacactgggtacttcctgcgcgacatcctcgacgcggcgtcgacgcgcgctgcg
gtcgccagctga

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