Agromyces badenianii: DCE93_07955
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Entry
DCE93_07955 CDS
T05411
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
agm
Agromyces badenianii
Pathway
agm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
agm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DCE93_07955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agm03400
]
DCE93_07955
DNA repair and recombination proteins [BR:
agm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DCE93_07955
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DCE93_07955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
nSTAND1
AAA_16
RsgA_GTPase
APS_kinase
DnaJ_CXXCXGXG
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AWB95604
UniProt:
A0A2S0WWN1
LinkDB
All DBs
Position
complement(1669008..1671899)
Genome browser
AA seq
963 aa
AA seq
DB search
MPVSRLDAHSHLSVRGARVHNLQNVDVEIPRDAMVVFTGLSGSGKSSLAFDTIFAEGQRR
YVESLSAYARQFLGQVDRPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIYDYMRLLW
ARIGVPHCPVCGERIQRQTVQQIADQLMELPEGTRYQVVSPVVSKKKGEFVDLFRDLAAQ
GYSRAVVDGDVIRLDEPPKLKKQVKHDISVVIDRLVAGPELLGRLTDSLETALRLTDGLV
QVNYVDETGPAAWATFSEKLSCPNQHPIQLTEIEPRTFSFNAPFGACPECSGLGTRMSVD
DSLLLGDQSLSIAEGVILPWTSQGKSLYNYYEKLLGGLARDLDFSLDTPWEELDDVARQA
VLRGDNFEVKVKWRNRYGREMSYTSGFEGVVPYIERQYLQAETDVQRARWSEYLREVPCP
VCDGKRLKPEVLSVLIHDASIADVGLLSLTDARAFMDRLELTDREQAIAAQVLREIKLRL
DFLIRVGLSYLDLSRAAATLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNRRL
IDTLIALRDLGNTLIVVEHDEDTIRTADWIVDIGPGAGVNGGTVVHSGSYADLVKNTRSL
TGDYLSGRKEIAMPEQRRRIDPERTIVVQGAEANNLRGVDVEFPLGVLTAVTGVSGSGKS
SLVNDILYRVLANRLNGARKVPGKHRRVTGLDQLDKVVHVDQAPIGRTPRSNPATYTGVF
DRIRNLFSETTEAKARGYLPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVACEVCGG
QRYNRETLQVHYKGKNIAEVLEMPISEAAEFFEPISAIHRYLKTLVDVGLGYVQLGQSAT
TLSGGEAQRVKLATELQRRSNGRSVYVLDEPTTGLHFEDVQKLLKVLGKLVDKGNTVIVI
EHSLDVIKSADWVIDLGPEGGSGGGQIVATGTPEEVAAVSESHTGYFLRDILDAASTRAA
VAS
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
gtgccagtttcacgtctcgatgcccattcgcacctgagtgttcgcggtgcccgcgtgcac
aacctgcagaacgtcgacgtcgagattccgcgcgacgcgatggtcgtgttcacgggtctg
tcgggctccggcaagtcatcgctcgccttcgatacgatcttcgccgaggggcagcgacgg
tacgtcgagtcgctctcggcctacgcccggcagttcctcggccaggtcgaccgacccgac
gtcgacttcatcgaggggctgagcccggcggtgtcgatcgaccagaagtccaccaaccgc
aacccgcgctcgaccgtcggcacgatcaccgagatctacgactacatgcgcctgctctgg
gcgcgcatcggcgtgccgcactgcccggtgtgcggcgagcgcatccagcgccagacggtg
cagcagatcgccgaccagctcatggagctgcccgagggcactcgctaccaagtggtgagc
ccggtcgtgtcgaagaagaagggcgagttcgtcgacctcttccgcgatctcgccgcgcag
gggtactcgcgggcggtcgtcgacggcgacgtcatccggctcgacgaaccgccgaagctg
aagaagcaggtcaagcacgacatctcggtcgtcatcgaccggctcgtcgccggccccgaa
ctgctcgggcgcctcaccgactccctcgagacggcgctgcgcctgaccgatgggctcgtg
caggtcaactatgtcgacgagaccggcccggccgcgtgggcgaccttctccgagaagctc
tcgtgcccgaaccagcacccgatccagctcaccgagatcgagccgcgaaccttctcgttc
aacgcgccgttcggagcctgtcccgagtgctcgggcctcggcacccgcatgtcggtcgac
gattcgctgctgctcggcgatcagagtctcagcatcgccgaaggcgtgatcctgccgtgg
acgtcgcagggcaagagcctctacaactactacgagaagctcctcggcggcctcgcccgc
gacctcgacttctcgctcgacaccccgtgggaggagctcgacgacgtcgcccgacaggcg
gtgcttcgcggcgacaacttcgaggtcaaggtgaaatggcgcaaccggtacggccgcgag
atgagctacacctcgggcttcgagggcgtggtgccctacatcgagcgccagtacctccag
gccgagaccgatgtgcagcgggcccgctggtcggagtacctgcgcgaggtgccgtgcccg
gtctgcgacggcaagcggctgaagcccgaggtgctctcggtgctcatccacgacgcgagc
atcgccgatgtcgggctcctgagcctcaccgacgcccgcgcattcatggaccggctcgaa
ctgaccgatcgcgagcaggcgatcgcggcgcaggtgctgcgagagatcaagctgcgcctc
gacttcctgatccgcgtcggcctcagctatctcgatctgtcgcgggcagcggccactctc
tccgggggagaagcgcagcgcatccgactcgccacccagatcggctcggggctcaccggc
gtgctctacgtgctcgacgagccgagcatcggcctgcaccagcgcgacaatcgacgcctc
atcgacacgcttatcgcgctgcgcgatctcggcaacaccctgatcgtcgtcgagcacgac
gaagacaccatccgcaccgccgactggatcgtcgacatcggcccgggcgcgggggtcaac
ggcggcaccgtcgtgcactccggcagctatgccgacctcgtgaagaacacgcgctccctc
accggcgactatctctcgggccgcaaagagatcgcgatgcccgagcagcggcgccgcatc
gatcccgaacgcacaatcgtcgtgcagggtgcagaggccaacaacctgcgcggcgtcgac
gtcgagttccccctcggcgtgctgaccgcagtgaccggcgtcagcgggtcgggcaagtcg
tcgctcgtcaacgacatcctctatcgggtgctcgcgaaccgcctcaacggtgcgcgcaag
gtgccgggcaagcatcgccgggtcacgggactcgatcagctcgacaaggtcgtgcacgtc
gaccaggcgccgatcgggcgcaccccccgttcgaatcccgccacgtacacgggcgtcttc
gatcgcatccgcaacctcttctccgagacgaccgaggcgaaggcccgcggctacctgccc
ggtcgcttcagcttcaacgtcaagggcgggcgctgcgaggcatgctccggcgacggcacg
atcaagatcgagatgaacttcctgcccgacgtctacgtcgcgtgcgaggtctgcggcggc
cagcggtacaaccgcgagaccctgcaggtgcactacaagggcaagaacatcgccgaggtg
ctcgagatgccgatcagcgaggcggccgagttcttcgaaccgatctcggccatccaccgg
tacctcaagacactcgtcgacgtcggactcggctacgtgcagctcggccagagcgccacg
accctgtcgggtggcgaggcgcagcgggtgaagctcgcgaccgagctgcaacggcgctcg
aacggccgcagcgtctacgtgctcgacgagcccacgaccggcctgcacttcgaagacgtg
cagaagctgctcaaggtgctcggcaagctcgtcgacaagggcaacacggtcatcgtgatc
gagcacagcctcgacgtcatcaagtcggccgactgggtcatcgacctcgggcccgaaggc
ggctcgggcggcggccagatcgtggcgacgggcacgcccgaagaggtcgccgcggtgtcc
gagagccacactgggtacttcctgcgcgacatcctcgacgcggcgtcgacgcgcgctgcg
gtcgccagctga
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