KEGG   Agromyces badenianii: DCE93_07980
Entry
DCE93_07980       CDS       T05411                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
agm  Agromyces badenianii
Pathway
agm03030  DNA replication
agm03410  Base excision repair
agm03420  Nucleotide excision repair
agm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:agm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DCE93_07980
   03410 Base excision repair
    DCE93_07980
   03420 Nucleotide excision repair
    DCE93_07980
   03440 Homologous recombination
    DCE93_07980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:agm03032]
    DCE93_07980
   03400 DNA repair and recombination proteins [BR:agm03400]
    DCE93_07980
Enzymes [BR:agm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DCE93_07980
DNA replication proteins [BR:agm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DCE93_07980
DNA repair and recombination proteins [BR:agm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DCE93_07980
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DCE93_07980
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AWB95608
UniProt: A0A2S0WWD6
LinkDB
Position
complement(1678218..1680917)
AA seq 899 aa
MSDAEKPTLLVVDGHSLAFRAFYALPVDSFTTRDGQHTNAIHGFLSMLLLLLQNEKPTHI
AVAFDISRFSFRTREYPEYKGTRGETPVEFKGQVPLLQDALKAMGVRTLEKEDYEADDIL
ATLAARGRAEGYRVLLVSGDRDTIQLVNDDVTLLYPNTQGVSQLKRYDTAAVMERYGIRP
EQYPDVAALVGESSDNLIGITKVGEKTAVKWLGLYGDLDGILEHADEIKGVVGQNLRDEK
ENAIRNRRLNRLVDDVELDVSLDELAAKPIDIEAVQPLFERLEFRTLFERMKKIAAGEAN
GSASPSSTPAVAAAPAEDASPAPVAPASRRLLDEELAAWLERAVAAEPAGLGLSLEVLDG
RVIGAGIATADETVHLSWQSGRSDYAPFEAWLASDAPKIMTDAKPQLKALMRSGLAFDGL
VVDTLVAGWLVRPILAEKTLADLVERYLGENVPQADPAQLVPEEGADAGAPEYAWYTLRL
APVVLRALPETSRQLLADIEMPLVRVLAAMELRGVSVDHTELAALSAELGARAAGLAEAA
FAEIGREVNLGSPKQLQEVLFDQLGMPKTRATKTGYTTDASALADLQESNPHPFLGYLLE
HRDATKLRQIVESLDKSIADDGRIHTSYGQIGAATGRMSSNDPNLQNIPIRTEDGRRIRK
AFRHGTEYTELLTADYSQIEMRIMAHLSGDPGLIEAFNAGEDLHRFVGARVFSVDPGDVT
PVMRTKVKAMSYGLAYGLSAFGLSKQLRIDRAEATQLMKEYFERFGAVRDYLRSVVEQAK
IDGYTETIFGRRRPFPDLNSPNRVHRENAERAALNSPIQGSAADIIKIAMSRVEVDLAER
GLGSRMLLTVHDELIFEVAEGESEVLEEVVRDRMAHAAELLVPLDVQIGRGANWEDAAH
NT seq 2700 nt   +upstreamnt  +downstreamnt
gtgtcggacgcagaaaagcccaccctcctcgtcgtcgacggccattcgttggccttccgg
gccttctacgccctcccggtcgacagcttcaccacccgtgacggacagcacacgaacgcc
atccacggcttcctgtcgatgctgctcctgctcctgcagaacgagaagccgacgcacatc
gccgtcgcgttcgacatctcgcgcttctcgttccgcacgcgggagtaccccgagtacaag
ggcacccgcggtgagacgccggtcgagttcaaggggcaggtgccgctgctgcaagacgcc
ctgaaggcgatgggcgtgcgcaccctcgagaaagaggactacgaggccgacgacatcctc
gcgacgctcgcggcgcgtgggcgggcagagggctaccgggtgctgctcgtctcgggcgac
cgcgacaccattcagctcgtcaacgacgacgtcacgctgctctacccgaacacgcagggc
gtctcgcagttgaagcgatacgacacggcggcggtcatggaacgctacggcatccggccc
gagcagtaccccgatgtcgcggcgctcgtcggcgaatcgagcgacaacctcatcggcatc
acgaaggtcggagagaagaccgcggtcaagtggctcggtctctacggcgacctcgacggc
atcctcgagcacgccgacgagatcaagggcgtcgtcgggcagaacctgcgcgacgagaaa
gagaacgcgattcgcaaccgtcggctcaaccggctggtcgacgacgtcgaactcgacgtg
tcgctcgacgagctcgctgcgaagccgatcgacatcgaggccgtgcagccgctcttcgag
cgactcgagttccgcacgcttttcgaacgcatgaagaagatcgccgcgggcgaggcgaat
ggcagcgcgagcccctccagcaccccggcggtcgcggcggcaccggcggaggatgcgtct
cccgcgcccgtcgcgccggcctcgcgccgattgctcgacgaagaactcgccgcttggctc
gaacgcgccgtcgccgccgaaccggccgggctcgggctcagcctcgaagtgctcgacggc
cgtgtgatcggcgccggcatcgcgaccgcagacgagaccgtgcacctgtcgtggcagtcc
gggcgttccgactacgcgccgttcgaggcgtggctcgcgagcgatgcaccgaagatcatg
accgacgcgaagccgcagctgaaggcgctcatgcgttcggggctcgccttcgacgggctc
gtcgtcgacaccctcgtcgccgggtggctcgtacggccgatcctcgccgagaagacgctc
gccgacctcgtcgagcgatacctcggcgagaacgttccccaggccgaccccgcccaactc
gtgcccgaagaaggcgccgacgcgggtgcacccgagtacgcctggtacacccttcggctc
gcacccgtcgtgctccgggcgcttcccgagacctcacggcagctgctcgccgacatcgag
atgccgctcgtgcgtgtgctcgcggcgatggagctgcgcggggtgagcgtcgaccacacc
gagctcgcggcactctcggcggaactcggtgcgcgggccgcgggcctggccgaggcggcc
ttcgccgagatcgggcgcgaggtcaacctcggttcgcccaagcagctgcaggaggtgttg
ttcgaccagctcggcatgccgaagacgcgggcgacgaagacgggctacacgaccgatgcg
agcgcgctggcagatctccaggagtcgaacccgcacccgttcctcggctacctgctcgag
caccgcgacgccacgaagctgcgccagatcgtcgagtccctcgacaagtcgatcgccgac
gacggccgcatccacacgagctacggccagatcggcgccgcgaccggtcgcatgtcgtcg
aacgatccgaacctgcagaacatcccgatccgcaccgaagacggccgacgcatccgcaag
gcgttccggcacggtacggagtacaccgagctgctcacggccgactactcgcagatcgag
atgcgcatcatggcgcacctctcgggtgacccagggctcatcgaggcgttcaacgcgggt
gaagacctgcaccgcttcgtcggcgcgcgcgtgttctccgtcgacccgggcgacgtcacc
ccggtgatgcgcaccaaggtgaaggcgatgtcgtacggcctcgcctacggactcagcgcg
ttcgggctctcgaagcagctccgcatcgatcgcgccgaggcgacgcagctcatgaaggag
tacttcgagcgcttcggagccgtgcgcgactacctgcgcagcgtcgtcgagcaggccaag
atcgacggatacaccgagacgatcttcggccggcggcgtccgttcccagacctcaacagc
ccgaaccgggtgcaccgcgagaacgccgagcgcgcggcactgaactcgcccatccagggc
tcggccgccgacatcatcaagatcgcgatgtcgcgggtcgaggtcgatctcgccgagcgc
ggactcggcagtcgcatgctgctgaccgtgcacgacgagctcatcttcgaggtcgccgag
ggtgagtccgaggtgctcgaagaggtcgtgcgcgaccgcatggcgcacgccgccgagctc
ctcgtgccgctcgacgtgcagatcgggcgcggcgccaactgggaagacgcggcgcactag

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