Agromyces badenianii: DCE93_08115
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Entry
DCE93_08115 CDS
T05411
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
agm
Agromyces badenianii
Pathway
agm00220
Arginine biosynthesis
agm00240
Pyrimidine metabolism
agm00250
Alanine, aspartate and glutamate metabolism
agm01100
Metabolic pathways
agm01110
Biosynthesis of secondary metabolites
agm01240
Biosynthesis of cofactors
Module
agm_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
agm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
DCE93_08115 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DCE93_08115 (carB)
00220 Arginine biosynthesis
DCE93_08115 (carB)
Enzymes [BR:
agm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
DCE93_08115 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATPgrasp_Ter
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AWB95632
UniProt:
A0A2S0WWD3
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All DBs
Position
complement(1708097..1711384)
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AA seq
1095 aa
AA seq
DB search
MPKRDDINSVLVIGSGPIVIGQAAEFDYSGTQACRVLRAEGVRVILVNPNPATIMTDPDF
ADATYIEPITPEIIESIIVKEKPDAVLPTLGGQTALNAAIALHDAGILEKHGVELIGAKV
DAIRKGEDRQLFKDLVIEAGAGVARSHVAKTLEQAKEFALDLGYPLVVRPSFTMGGLGSG
FAYTEDELVRIVTQGLHDSPTTEVLLEESILGWKEYELELMRDTADNTVVVCSIENVDPV
GVHTGDSITVAPALTLTDREFQHLRDIGIDIIRAVGVDTGGCNIQFAIDPADGRVIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAIGYRLDEIPNDITRVTPASFEPTLDYVVVKVPR
FAFEKFPAADPTLTTTMKSVGEAMAIGRNYATALQKALRSLEKRGSSFHWGDEKRTAEEL
VEASRIPTDGRIVLVQQALRKGASLEQLFEATKIDPWFLDQIVLINEVAETIASAENLDT
ELLLLAKDHGFSDAQIGQLRGFGEADAREVRHILGIRPVYKTVDTCAGEFPALTPYHYSS
YDVETEVEPSDRSKVVILGSGPNRIGQGVEFDYSCVHASFALSAAGFETIMINCNPETVS
TDYDTSDRLYFEPLTLEDVLEVIHAESQSGELVGVVVQLGGQTALGLAKGLEAAGIPILG
TSPEAIDLAEERGLFSGILDAAGLLAPKNGTAIDLAGAVHVAEGIGYPVLVRPSYVLGGR
GMEIVYDSPSLADYFARIEGQGIVGPTHPLLVDRFLDDAIEIDVDALYDGTDLYIGGVME
HIEEAGIHSGDSSCTLPPVTLGRAEVDRVRVATRAIAEGIGVRGLLNVQFAIGAGVLYVL
EANPRASRTVPFVSKALGIPLAKAASRIMVGATVAELIAEGMLPASDGSRVPLDAPIAVK
EAVLPFHRFRTREGIMVDSVLGPEMRSTGEVMGIDKDFPTAFAKSQLAAYGGMPTSGTVF
VSVSDRDKRSIILPVLRLQQLGYDIAATEGTAEVLRRNGIRAQVVLKFSDKTSEDAASVV
ELIHRGEVDVVVNTPSGRSSRADGYEIRAAAVAADIPLFTTIAELSAAVASLDVQREGFE
VTSLQEYQLRREANA
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgcgacgacatcaacagcgttctcgtcatcggatccggcccgatcgtcatc
gggcaggccgccgagttcgactactcgggcacccaggcgtgccgcgtgctgcgggccgag
ggcgtgcgggtcatcctcgtgaacccgaaccccgcgacgatcatgaccgaccccgacttc
gccgacgcgacgtacatcgagccgatcacgcccgagatcatcgagtcgatcatcgtcaag
gagaagcccgacgcggtgctcccgacgctcggcggccagacggcgctgaacgcggcgatc
gccctgcacgacgccggcatcctcgagaagcacggcgtcgagctcatcggcgcgaaggtc
gacgcgatccgcaagggcgaagaccgccagctcttcaaggacctcgtgatcgaggcgggc
gctggcgtcgcccgatcgcacgtcgcgaagacgctcgagcaggcgaaggagttcgcgctc
gacctcggctacccgctcgtggtgcgcccgtcgttcacgatgggcggactcggctcgggc
ttcgcgtacaccgaggacgagctcgtgcgcatcgtcacgcagggcctgcacgactcgccg
acgaccgaggtgctcctcgaggagtcgatcctcggctggaaggagtacgagctcgaactc
atgcgcgacaccgccgacaacacggtcgtcgtctgctcgatcgagaacgtcgaccccgtc
ggcgtgcacaccggtgactcgatcaccgtggcacccgcgctcacgctgaccgaccgtgaa
ttccagcacctgcgtgacatcggcatcgacatcatccgcgccgtcggcgtcgacaccggc
ggctgcaacatccagttcgcgatcgacccggccgacggccgcgtcatcgtcatcgagatg
aacccgcgtgtctcccgctcgagcgcgctcgcctcgaaggccaccggcttcccgatcgcg
aagatcgccgcgaagctcgccatcggctaccgcctcgacgagatcccgaacgacatcacg
cgggtgaccccggcgtcgttcgagccgaccctcgactacgtcgtcgtcaaggtgccccgg
ttcgcgttcgagaagttcccggccgccgaccccaccctcaccaccaccatgaagtcggtc
ggcgaggcgatggcgatcggccgcaactatgcgaccgcgctgcagaaggcgctccgctcg
ctcgagaagcgcggctcctcgttccactggggagacgagaagcgcaccgccgaggagctc
gtcgaggcatcccgaattcccaccgacggccgcatcgtgctcgtgcagcaggcgctccgc
aagggtgccagcctcgagcagctcttcgaggcgacgaagatcgacccgtggttcctcgac
cagatcgtgctcatcaacgaggtcgccgagaccatcgcctcggccgagaacctcgacacc
gagctcctgctgctcgcgaaggaccacggcttctccgacgctcagatcggccagctccgc
ggcttcggcgaggccgacgcccgcgaggttcgccacatcctcggcatccgcccggtctac
aagacggtcgacacgtgcgccggcgagttcccggcgctcacgccgtaccactactcgagc
tacgacgtcgagaccgaggtcgagcccagcgaccgcagcaaggtcgtcatcctcggctcg
ggcccgaaccgcatcggccagggcgtcgagttcgactactcgtgcgtgcacgcctccttc
gcgctgtcggccgccgggttcgagacgatcatgatcaactgcaaccccgagacggtctcg
accgactacgacacgagcgaccggctctacttcgagccgctcaccctcgaagacgtgctc
gaggtcatccacgccgagtcgcagtcgggcgagctcgtcggcgtcgtcgtgcagctcggc
ggccagaccgccctcggactcgccaagggactcgaggccgcaggcatcccgatcctcggc
acgagccccgaggcgatcgacctcgccgaggagcgcgggctcttctccggcatcctcgac
gcggcgggcctgctcgcgccgaagaacggcaccgccatcgatctcgccggcgcggtgcac
gtcgcagagggcatcggctaccccgtgctcgtgcgtccgagctacgtgctcggcgggcgc
ggcatggagatcgtctacgactcgccgtcgctcgccgactacttcgcgcgtatcgagggc
caaggcatcgtcgggccgacgcatccgctgctcgtcgaccggttcctcgacgacgcgatc
gagatcgacgtcgacgccctatacgacggcaccgacctgtacatcggcggcgtcatggag
cacatcgaggaggccggcatccactccggcgactcgagctgcaccctgccgcccgtgacg
ctcggccgcgccgaggtcgaccgggtgcgcgtggcgacgcgcgccatcgccgagggcatc
ggcgttcgcggcctgttgaacgtgcagttcgcgatcggcgccggcgtgctctacgtgctc
gaagccaacccgcgcgcgagccgcaccgtgcccttcgtctcgaaggccctgggcatcccg
ctcgcgaaggccgcctcgcgcatcatggtcggtgcgaccgtcgccgaactcatcgccgag
ggcatgcttcccgcgtccgacgggtcgcgagtgccgctcgacgcaccgatcgccgtgaaa
gaggccgtgctgccgttccaccgcttccgcacccgcgagggcatcatggtcgactcggtg
ctcggccccgagatgcgttcgaccggcgaggtcatgggcatcgacaaggacttcccgacg
gcgttcgcgaagagccagctcgccgcgtacggcggcatgccgacgtcgggaaccgtcttc
gtctcggtctccgatcgcgacaagcggtcgatcatcctccccgtgctccgtctgcagcag
ctcggctacgacatcgcagcgaccgagggcaccgccgaggtgctgcggcgcaacggcatc
cgtgcgcaggtggtgctgaagttcagcgacaagacgagcgaggatgccgcgtcggtcgtc
gagctcatccaccgcggtgaggtcgatgtcgtggtgaacacccccagcgggcgttcgtcg
cgcgccgacgggtacgagatccgtgccgcggccgtggccgccgacatcccgctcttcacg
accatcgccgagctctcggcggccgtggcgtcactcgacgtacagcgcgagggattcgag
gtcacgagcctgcaggagtaccagctcaggcgggaggcgaacgcatga
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