Agromyces badenianii: DCE93_12240
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Entry
DCE93_12240 CDS
T05411
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
agm
Agromyces badenianii
Pathway
agm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DCE93_12240 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agm03019
]
DCE93_12240 (recQ)
03400 DNA repair and recombination proteins [BR:
agm03400
]
DCE93_12240 (recQ)
Enzymes [BR:
agm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DCE93_12240 (recQ)
Messenger RNA biogenesis [BR:
agm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DCE93_12240 (recQ)
DNA repair and recombination proteins [BR:
agm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DCE93_12240 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
BssS
Motif
Other DBs
NCBI-ProteinID:
AWB96324
UniProt:
A0A2S0WYN9
LinkDB
All DBs
Position
complement(2583638..2585680)
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AA seq
680 aa
AA seq
DB search
MSWNTEPDWADEVPWDPDELAPPPDDEWVPPVDDSGRGPAISPAPNRGVSNRGGGAAARP
PGSLTAPRRAAAARFDSAAEALHTVFGYDSFRGEQAQIIAQVAGGGDAVVLMPTGGGKSL
CYQIPSLLREGTGVVVSPLIALMHDQVDALVRNGVRAAYLNSSQQSPERAEVERAYLAGE
LDLLYVAPERLGGEQTKRFLEQGTVALFAIDEAHCVAQWGHDFRPDYLALSELAERWPDV
PRIALTATATEATHREITERLSLGGAEHFVSSFDRPNIQYRIDPKLEVRKQLLEFIRSEG
RDAAGDPVSGIVYALSRASTEKIAAFLAEHGINALPYHAGLDAGVRRRTQERFLREEGVV
VVATIAFGMGIDKPDVRFVAHVDLPKSVEGYYQETGRAGRDGAPATAWLAYGLQDVVQQR
RMIDESPGDLAHRRRLGQHLEAMLALCETVQCRRQNLLGYFGQPSTPCGNCDTCLEPPAS
WDGTVPAQKLMSTIVRLQRERRQKFGAGHLIDILRGKETPRVRQYGHDALATWSIGGDLS
DQQWRGVVRQLLAQGLLATHGEYGTLTVTDAAAEVLSGQRTVRLRTEPERAARSRGPRAA
PAAADLEPAQAELFELLRSWRAGEAKEQGVPAYIVFGDVTLRAVAVARPASLAELDGITG
IGVKKREAYGQALLAVVGAA
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgagctggaacacggaacccgactgggccgacgaggtcccgtgggatcccgacgagctg
gctccgccgcccgacgacgagtgggtgccgccggtcgacgattcgggtcgcgggccggcc
atctcgccggcgccgaaccgcggggtgtcgaaccgcgggggcggcgccgccgctcgcccg
cccggttcgctcaccgcgccgcgccgcgctgccgcagcgcggttcgattccgcggccgag
gccctccacacggtcttcggctacgacagcttccgcggcgagcaggcgcagatcatcgcc
caggtcgccggcggcggcgacgccgtcgtgctcatgccgaccggcggcggcaagagcctc
tgctaccagatcccgtcgctcctgcgcgagggcacgggcgtcgtcgtctcgccgctcatc
gcgctcatgcacgaccaggtcgatgcactcgtgcgcaacggcgtgcgcgccgcctacctc
aactcgagccagcagtcccctgagcgcgccgaggtcgagcgcgcgtacctcgcgggcgag
ctcgacctgctctacgtcgcccccgagcgactcggtggcgagcagaccaagcgattcctc
gagcagggcactgtcgcgctcttcgcgatcgacgaggcgcactgcgtcgcccagtggggg
cacgatttccgccccgactacctcgcgctctccgagctcgccgaacggtggcccgatgtg
ccccgcatcgccctcaccgccacggcgaccgaggccacccaccgcgagatcaccgagcga
ctgagcctcggcggtgccgagcacttcgtctcgagcttcgaccggccgaacatccagtac
cgcatcgacccgaagctcgaggtgcgaaagcagctgctcgagttcatccgcagcgagggg
cgggatgccgcgggcgaccccgtctcgggcatcgtctacgcgctctcgcgggcgagcacc
gagaagatcgccgcattcctcgccgagcacggcatcaacgcgctgccgtaccacgcgggt
ctcgatgccggtgtgcgccgtcgaacccaggagcggttcctgcgcgaagagggcgtcgtc
gtggtcgcgacgatcgccttcggcatgggcatcgacaagcccgacgtgcgtttcgtcgcc
cacgtcgacctgccgaagtccgtcgagggctactaccaggagaccggtcgtgccggccgc
gacggcgccccggcgaccgcgtggctcgcctacggcctgcaagacgtcgtgcagcagcgc
cgcatgatcgacgagagcccgggcgacctcgcgcaccggcgccggctcgggcagcacctc
gaggccatgctcgccctctgcgagaccgtgcagtgccgccgccagaacctgctcggctat
ttcggccagccgagcacgccgtgcggcaactgcgacacctgcctcgagccgcccgcctcg
tgggacggcaccgtgcccgcgcagaagctcatgtcgacgatcgtgcgactgcagcgcgag
cgacggcagaagttcggcgccggtcatctcatcgacatcctgcgcggcaaagagacgccg
cgggtgcgccagtacggccacgatgccctcgccacgtggagcatcggcggagacctcagc
gaccagcagtggcgcggagtcgtgcggcagctgctcgcccagggcctgctcgccacccac
ggcgagtacggcacgctgacggtgacggatgccgcggccgaagtgctctcgggccagcgc
acggtcaggctccgcaccgaacccgagcgcgcggcgcggtcccgcggcccgagggcggcg
ccggccgccgccgacctcgaaccggcgcaggccgagctcttcgagctgctccgctcctgg
cgtgcgggtgaggcgaaagagcagggcgtgccggcctacatcgtcttcggcgacgtcacc
ctgcgcgccgtcgccgtcgccaggcctgcgagcctcgccgagctcgacggcatcaccggc
atcggcgtgaagaagcgcgaggcctacgggcaggcgctgctcgccgtggtcggggccgcc
tga
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