Anoxybacillus gonensis: AFK25_00565
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Entry
AFK25_00565 CDS
T04000
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
agn
Anoxybacillus gonensis
Pathway
agn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
agn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AFK25_00565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
agn03021
]
AFK25_00565
03400 DNA repair and recombination proteins [BR:
agn03400
]
AFK25_00565
Enzymes [BR:
agn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AFK25_00565
Transcription machinery [BR:
agn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AFK25_00565
DNA repair and recombination proteins [BR:
agn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AFK25_00565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AKS37106
UniProt:
A0AAW7TJE1
LinkDB
All DBs
Position
107192..110752
Genome browser
AA seq
1186 aa
AA seq
DB search
MTGQLVQYGRHRQRRSYARISEVLELPNLIEIQTSSYQWFLDEGLREMFQDISPIEDFTG
NLSLEFIDYSLGEPKYSVEESKERDVTYAAPLRVKVRLINKETGEVKEQDVFMGDFPLMT
ETGTFIINGAERVIVSQLVRSPSVYYSGKVDKNGKRGFTATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIVDLLGDNEYIRNTLEKDNTESTEKALLEIYERL
RPGEPPTVENAKSLLISRFFDPKRYDLASVGRYKINKKLHIKNRLFGQRLAETLVHPETG
EVIAEKGTVLDRRTLDRILPELEKGIGMRKYQPLGGVVEDEFALQAIKIYAPNDPDGEKV
ITVISNGYIPETVKHITPADIIASISYFFNLLHGVGDTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDTNTITPQQLINIRPVIAAIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSTYAKVNKF
GFIETPYRRVDPETGKVTNQIDYLTADEEDNYVVAQANVPIAEDGTFLEENVVARFRGEN
IVVKRDRVDYVDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLMQPEAPIVGT
GMEYVAAKDSGAAVICKHRGIVERVEAKEIWVRRLIEVDGKEVKGDLDKYRLLKFVRSNQ
GTCYNQRPIVKAGDIVEKGEILADGPSMEKGELALGRNVLVAFMTWDGYNYEDAIIMSER
LVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIVRIGAEVKDGD
LLVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKVFTREDGDE
LPPGVNQLVRVYIVQKRKISEGDKMAGRHGNKGVISRILPEEDMPFLPDGTPVDIMLNPL
GVPSRMNIGQVLELHLGMAARKLGLHVASPVFDGAREEDVWATLEEAGMARDAKTVLYDG
RTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLGM
DVTVLSSDEKEISMENFGEDDDVQPVDIIPPTDESAKEDEGVVVKE
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcaatacggacgacaccgccaacgaagaagttatgcgcgcatt
agtgaagtgttggagttaccgaacttaatcgaaattcaaacttcttcttaccagtggttt
ctcgacgaaggattgcgtgaaatgttccaagatatttcaccgatcgaagattttacagga
aatttgtcactagaatttattgattacagcttaggagagccgaagtactctgtagaagag
tcaaaagaacgcgatgttacatacgcagcaccgcttcgggtgaaagtacgcctaatcaat
aaagaaacaggtgaagtaaaagagcaagatgtatttatgggagacttcccattaatgaca
gaaacgggtacgttcattattaatggtgctgaacgtgttatcgtttctcagcttgttcgt
tcaccgagcgtttattacagcggaaaagtagataaaaacggaaaacgtggctttacagct
actgttattccgaaccgcggtgcatggcttgaatacgaaacagatgcaaaagacgttgtt
tacgttcgcattgatcgtacgcgtaagttgcctgtaaccgtgttattacgagcgttaggt
tttggctcggaccaagagattgtcgatttacttggtgataatgagtatattcgtaatacg
ttagaaaaagacaatacagaaagtacagaaaaagcgttgcttgaaatttatgaacggtta
cgtccaggggagccgcctaccgttgaaaacgcaaaaagcttgcttatctctcgtttcttc
gatccaaaacgatatgatttagcaagtgttggtcgttataaaattaacaaaaagctccat
attaaaaaccgtttatttggtcaacgtttagcggaaacgctcgttcatccggaaacgggt
gaagtgattgctgagaaaggaaccgttcttgatcgaagaacgctcgaccgcattttacct
gagcttgaaaaaggaattggtatgcgcaaataccaaccgcttgggggcgttgtcgaagat
gaatttgctttgcaagcaatcaaaatttatgctccaaacgatccagatggcgaaaaagtc
atcacggtcattagtaatggatatattccagaaacggtaaaacatattacacctgcagat
attattgcatctattagctacttctttaacttattgcatggagtcggtgatacagacgat
atcgaccatttaggaaatcgtcgacttcgttctgttggcgagttgctgcaaaatcaattc
cgaatcggactttcgcgcatggagcgcgttgttcgtgaacggatgtccattcaagataca
aacacaattacaccacagcaactcattaatattcgcccagtcattgcggctattaaagag
tttttcggaagctcgcagttatcgcaattcatggaccaaacaaacccacttgcagaattg
acacataaacgtcgtctttctgcccttggtccaggtggtttaacgcgtgaacgcgcaggc
tttgaagtgcgtgacgttcactactcgcactatggacgcatgtgtccgatcgaaacgcca
gaaggtccgaacatcggattaattaactcgctttccacatatgcgaaagtgaataaattt
ggttttattgaaactccttatcgccgagtcgatcctgaaacagggaaagtaacgaatcaa
attgactatttaacggcggatgaggaagataattacgtcgttgcccaagcgaacgttccg
attgcggaagatggaacatttttagaagaaaacgttgttgctcgcttccgtggtgaaaat
atcgttgttaagcgcgatcgtgtggattatgtagacgtttctccaaaacaagttgtgtcg
gtagcgacagcgtgcattccgtttttagaaaacgatgactcgaaccgtgcgcttatgggt
gcgaacatgcaacgtcaagctgttccgcttatgcagccggaggcgccaatcgttggtaca
ggaatggagtatgtcgcagcaaaagattctggagcagcggttatttgtaaacatcgcgga
atcgttgagcgagttgaagcgaaagaaatttgggtacgccgtttaatcgaagtcgatgga
aaagaagtcaaaggtgacttagataaatatcgtctgttgaagtttgttcgttcaaaccaa
ggaacgtgctacaaccaacgcccgattgttaaagcaggagatatcgtggagaagggtgag
attttagctgacggtccatcgatggaaaaaggtgaattagcgcttggtcgcaacgtgctt
gttgcgtttatgacatgggatggatacaactacgaagacgcgattattatgagcgagcgt
ctcgttaaagacgatgtatatacgtctattcatattgaggaatacgaatctgaagcgcgc
gatacgaagctcggtccagaagaaattacgcgcgatattccaaacgtcggtgaagatgcg
cttcgcaatctagatgaacgcggaattgtacgcatcggtgcagaagtaaaagatggcgac
ttgctcgttggaaaagtaacaccaaaaggggttacggaattaacagctgaagaacggtta
cttcatgcgattttcggagagaaggcgcgtgaagttcgagatacgtctttacgcgtaccg
cacggtggaggcggaatcgttcttgatgttaaagtgtttactcgcgaagatggcgatgag
ttgccaccgggcgtgaatcagcttgttcgtgtgtacattgtacaaaaacggaaaatttct
gaaggtgacaaaatggcaggtcgccacggaaataaaggtgttatttcgcgcattttacct
gaagaagatatgccgtttttaccagatggtacaccggttgatatcatgttaaacccgcta
ggcgtaccttcgcgtatgaatatcgggcaagtactcgaattgcatctcggaatggcggcg
agaaagctaggccttcatgtcgcttcacctgtatttgacggtgctcgcgaagaagatgta
tgggcaacgttagaagaggcaggaatggcgcgcgatgcgaaaacagttttatatgacgga
cggacaggagagccgtttgataatcgtgtttctgtcggtattatgtatatgattaagctc
gcgcacatggttgacgataagttacatgctcgctcgacaggtccatattcacttgttacg
caacaaccgctcggtggaaaagcgcagtttggtggtcagcgtttcggtgagatggaagta
tgggcgcttgaggcatacggtgcagcttacacgttgcaagaaattttaactgtcaaatca
gacgacgtcgttggtcgtgtgaaaacgtacgaagcgatcgtgaaaggtgaaaacgttcca
gaaccaggcgttcctgaatctttcaaagtattaattaaagagctacaaagcttaggtatg
gacgtaacagtattatcaagcgatgaaaaagaaattagcatggaaaacttcggggaagat
gatgacgtgcaaccagttgacatcatcccacctacagatgagtcagccaaagaagatgaa
ggtgttgttgtaaaagaatag
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