Anoxybacillus gonensis: AFK25_01080
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Entry
AFK25_01080 CDS
T04000
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
agn
Anoxybacillus gonensis
Pathway
agn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
agn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFK25_01080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
agn03019
]
AFK25_01080
03009 Ribosome biogenesis [BR:
agn03009
]
AFK25_01080
Enzymes [BR:
agn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AFK25_01080
Messenger RNA biogenesis [BR:
agn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AFK25_01080
Ribosome biogenesis [BR:
agn03009
]
Prokaryotic type
rRNA helicases
AFK25_01080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
NDK
AAA_19
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AKS37195
UniProt:
A0AAW7TL08
LinkDB
All DBs
Position
191009..192415
Genome browser
AA seq
468 aa
AA seq
DB search
MVTFKEFGLSPEVMKAVSKMGFEEATPIQAATIPLSLQNRDVIGQAQTGTGKTAAFGIPL
VEKIDMNNDAVQAIVVAPTRELAIQVSEELYKIGSTKRVRVLPIYGGQDIERQIRALKKH
PHIVVGTPGRILDHIQRRTLRLQNVHTVVLDEADEMLNMGFVEDIEAILSHVPTERQTLL
FSATMPEPIRRIAERFMNNPELVRVKAKEMTVPNIEQYYIEIQEKKKFDTLTRLLDIQSP
ELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGSIDILVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGMAITFVTPREIGQLHHIEKTTK
RKMDRMKPPTLDEALEGQQRAAIEKLLATIEHNNLSFYKRAAEELLEEHDSVSLVAACIK
MLTKEPDMTPVQLTEEPPVMKKEKKRQVQTRQRRNETRGRGAKTRAKR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttggttacatttaaagaatttggattgagtccagaagtaatgaaagcagttagtaaaatg
ggatttgaagaggcaacaccgattcaggcggctacgattccgcttagtctacaaaatcgt
gatgtcattggtcaagcgcaaacaggaacagggaaaacggcggcattcggcattccgctt
gttgagaaaattgatatgaacaacgatgcagtgcaagcgatcgttgttgcgccaacgaga
gagttagctattcaagtgtccgaagagttatataaaatcggttcaacgaagcgtgtacgc
gtgttgccgatttacggtgggcaagacattgagcgacaaattcgggcattaaaaaagcac
ccacatattgttgtcggtacgccaggacgtattcttgatcatattcaacgtcgtacgctc
cgtttgcaaaacgtgcatacggttgtgttagacgaagcagatgaaatgttgaacatggga
tttgtcgaagacattgaggcgattttaagccacgtgccgacagagcgtcagacgcttctt
ttttcagcgacgatgccagagccgattcgtcgtatcgctgagcgatttatgaacaatccg
gagctcgttcgtgtcaaagcaaaagagatgacagttccaaacattgaacaatattacatt
gaaattcaagaaaagaaaaagtttgacacgttaacgcgtttattagatatccaatctcct
gagttagcgatcgttttcggaagaacgaagcgtcgtgtcgatgagctagcagaagcgctc
aatttgcgtggttatgcggctgaaggcattcacggtgatttaagccaggcgaagcgttta
tctgtgctgcgtaagtttaaagaaggttcgattgatattttagttgcaacggatgtcgct
gcacgcggtttagatatttctggtgtgacgcatgtatataatttcgatattccacaagac
ccagaaagctatgttcaccgcattggtcgcacaggacgtgctggtaaaacgggaatggcg
attacgtttgttacacctcgtgaaatcggacagttacatcatatcgagaagacgacgaag
cggaaaatggatcgtatgaaaccgccaacgttagatgaagcgcttgaaggtcaacaacga
gcagcgatcgaaaaattgctggcgacaattgagcataacaatttatcgttttacaaacgt
gcagcagaagaattgttagaagaacacgattccgtttcacttgttgccgcatgtattaaa
atgttaacgaaagagcctgatatgacgccagtacagctgacagaagagccgccggtgatg
aaaaaagagaaaaagcgacaagtgcagacgcgtcaacgccgcaatgaaacgcgtggccgt
ggagcaaaaacgcgtgcgaaacgatag
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