Anoxybacillus gonensis: AFK25_03030
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Entry
AFK25_03030 CDS
T04000
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
agn
Anoxybacillus gonensis
Brite
KEGG Orthology (KO) [BR:
agn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
agn03400
]
AFK25_03030
Enzymes [BR:
agn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AFK25_03030
DNA repair and recombination proteins [BR:
agn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AFK25_03030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
DEAD
AAA_22
ATPase_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AKS37531
LinkDB
All DBs
Position
534773..538246
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AA seq
1157 aa
AA seq
DB search
MNDMSVRFIIGRSGSGKTTMCLTEIIEQLVHEPDGDPIIYLVPEQMTFQSEYALMNANMK
GMIRAQVFSFTRLAWRVLQETGGMSRHHLTQTGVHMLLRKIVEQQKEQLKLFRKAADKRG
FIEQLEQMLTEYKRYCVTPAALKQTEEELRRHATANEMVLADKLKDTAMIFEQFEQQMAH
HYVDSEDYLRLLAEKIRHSSYMKRARIYMDGFYEFTPQEYMVIEQLFIHCPHVTVALTLD
APYEQLPNDLHVFRSTWRTYAQLREMALQNGVAIEKVEQLHENVRHKHEELRHLEAHYDD
RPVCVWPKQTEAIVIGEATTRRAEMEGIAREIIRLVRDEGYRYRDIALLIRNVSDYRDVL
KTVFADYRIPYFIDEKEPMLDHPFVECLRASIEAVRTNFRYEAVFRAVKTDLFFSLDEPI
HQMRMAIDQLENYVLASGIQGDKWTEHWTYRKYKGLEGIHAPQTDEEKRYEQQLNEWRKL
VISPLLFLQKRLKQAKTGRERCEALYAYAEQLHIPQKLQRWRDEAEERGDLTAMRHHEQV
WQAFIHLLDEYVEILGDESLSLETFFTIIETGLESLQFSLVPPATDQVLIAHFDRSRLSN
IRCTFLAGVNEGIIPMRKNDDGMLSEVDRELLHHYSVRVAPASRDRLLDEPFLLYLALVS
PSERLYVTYALADEQEKTLLPSMFMKRLTDMFPHVKKMQWGADPFFLPLHEQLSYMTNDI
ATLGPLVQQLEAWKRQYAIAPMWWDVYNTYVQHEQWKERIAVVVRALFYENRAKQLRKQL
AKELYGKKVKASISRMETFNRCPFAHFAAHGLKLKERTVFQLKAPDMGQLFHEALKVIAN
RLREERLPWSELSKQQCEQLSYEAVEQIAPYIQQEVLLSTHRYRYMKKKLQTIMTKATTV
LSEHAKRSGFVPIGVELGFGEGELLPPLSFTLSDGTVLQFVGRIDRVDQATSEQGVLLRI
IDYKSKQKTLDLTEVYYGLALQMLAYLDVVLEYAEKLVGTSAFPAGVLYFPIHNPTMKLN
EWLEEHELEKKFLEQFKMGGYVLADEQTVRLMDEQVEPGTSSLVIPVRLNKNGTFAQHSK
VLTEQQFTMLRQHVRRLIVDVGEQMVDGVTHIAPYKQKNKTACQYCEFRDVCQFDEGVDA
EQYRVFTPKNIDEWLKG
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatatgtctgtacgctttatcatcgggcggtcgggaagcggaaaaacgacgatg
tgtttaacggaaatcatcgaacaacttgtgcatgaacccgatggcgatccgattatatac
cttgttcctgaacaaatgacgtttcaatcggaatatgctctcatgaacgcaaacatgaaa
ggaatgattcgcgcacaagtgtttagtttcacgcgcctcgcttggcgcgtcttgcaagag
acaggcggcatgagccgccatcatttaacgcaaacaggcgtacatatgttgctaaggaaa
attgttgaacaacaaaaagaacagttaaagctgtttcgaaaagcagccgacaaacgcggc
tttattgaacaacttgaacaaatgttgacggaatataaacgatattgtgtgacgccagcc
gcattaaaacaaacggaagaagagctgcgccgtcatgcgaccgcaaacgaaatggtgctt
gctgataaattaaaagatacagcgatgatttttgagcaatttgaacaacagatggcgcat
cattatgtcgattcagaagattatttgcgtttgcttgctgaaaaaattcgccattcttcc
tatatgaaacgtgcacgcatttatatggatggcttttatgaatttacgccgcaagaatat
atggtgattgaacagttgtttattcattgcccacatgtgactgttgcgcttacgttagat
gctccgtatgaacaactaccaaacgatttgcacgtatttcgtagcacgtggcgaacgtat
gcccaactgcgcgaaatggcgctacaaaatggagtggcgattgaaaaagtagaacaactt
catgaaaacgtccgccacaaacatgaagaacttcgtcatcttgaagcacattacgatgat
cgtcctgtatgtgtatggccaaaacaaacggaagcgattgtcattggagaagcgaccacg
cgccgagcagaaatggaaggcattgctcgtgaaatcattcggcttgtgcgagatgaagga
tatcgctatcgtgacatcgctttgctcattcgcaacgtttcagactatcgtgacgtgtta
aaaacggtatttgcagattatcgcattccgtattttattgatgaaaaagaaccgatgctt
gatcatccgttcgttgaatgtttgcgcgcaagcatcgaagcggtacggacgaactttcgt
tacgaagcggtatttcgtgctgtgaaaaccgacttgtttttttcgcttgacgagccgata
catcagatgcgcatggcgatcgatcaacttgaaaactacgtgctcgcttcgggcatacaa
ggagacaaatggacagaacattggacgtaccgcaagtataaagggctcgaagggatccat
gcgccacaaacagatgaagaaaaacggtatgagcaacaattaaatgaatggcgcaagctt
gtcatttccccgttgttgtttttacaaaagcgattaaaacaagcaaagacagggcgtgaa
cgatgcgaagcgctatatgcatacgcggaacaacttcacattccacaaaagctacaacga
tggcgcgatgaagcggaagagagaggcgacttgactgctatgcgtcatcatgagcaagta
tggcaagcatttattcatttgcttgatgaatatgttgaaatattaggcgatgaatccctt
tcgctcgaaacgtttttcaccattattgaaacgggattagaaagtttgcagttttctctc
gtgccaccggcaaccgatcaagtgttaattgctcattttgatcgttcccgcctttccaac
attcgctgtacgtttcttgccggagtcaatgaaggcattattccgatgcgcaaaaacgat
gatgggatgttgtcggaagtggatcgggaattgttgcatcattattctgtacgcgttgcc
ccagcaagccgcgatcgcttgcttgatgagccgtttttgctttatttggcgctcgttagc
ccgtctgaacgtttatatgttacgtatgcgttagcggacgagcaagaaaaaacgttgttg
ccatcgatgtttatgaagcggttaacagatatgtttccgcatgtgaaaaaaatgcaatgg
ggagccgatccgtttttccttccgcttcatgaacaattgtcatatatgacaaacgatatt
gccacgctcggtccgttagtgcagcaacttgaagcatggaagcgacaatacgccatcgct
ccgatgtggtgggatgtatacaacacttatgtgcaacatgaacaatggaaagaacgaatc
gcggtcgttgtgcgtgcgttattttatgaaaaccgcgcgaaacagttacgtaagcagttg
gcgaaagagctatatgggaaaaaagtgaaggcgagcatttcacgtatggagacatttaac
cgttgtccgttcgctcattttgccgcgcacggtttaaagttaaaggaacgaacggtcttt
caattaaaggcgccagatatgggacagttgtttcacgaagcgttaaaagtgattgcgaat
cgcctgcgagaagaacggcttccatggagtgaattatcaaagcaacaatgtgaacagttg
tcatatgaggcggtggagcaaattgctccgtacattcaacaagaagtgttgttaagcacg
caccgttatcgatatatgaagaaaaagttacagacgattatgacgaaagccaccaccgta
ttaagcgaacatgcgaaaagaagcggatttgtaccgattggcgttgaattagggtttggt
gaaggggagttgctcccgccgctttcgtttacattatcggacgggacggtgttgcagttt
gtcgggcgcattgaccgcgtcgatcaagcaacgagcgaacaaggtgtacttcttcgcatt
attgattataaatcgaaacaaaagacgcttgatttaacggaagtatattacggtttagcg
ttacaaatgttagcgtatttagatgtcgtgcttgagtatgcggaaaagctcgttggcaca
tcggcgtttccagcaggggtgttgtactttccgattcataacccgacgatgaaactgaat
gaatggcttgaagagcacgagctagagaaaaagtttttagaacagtttaaaatgggtggc
tacgtgttagccgacgaacaaacggtgcggctgatggatgaacaagtagagccggggacg
agttctctcgttattcctgttcgattaaataaaaatggaacgtttgcgcaacattcgaaa
gtgttaactgagcaacaatttacgatgttgcggcaacatgtccgccgtctgatcgtcgat
gtaggtgaacaaatggtcgacggtgtgacgcatattgcaccgtacaaacaaaaaaataaa
accgcttgtcaatattgtgagtttcgcgatgtgtgccaatttgacgaaggggtcgatgcg
gaacaatatcgcgtgttcacaccgaaaaatatagatgaatggttaaaggggtga
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