KEGG   Anoxybacillus gonensis: AFK25_05965
Entry
AFK25_05965       CDS       T04000                                 
Name
(GenBank) Zn-dependent hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
agn  Anoxybacillus gonensis
Pathway
agn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:agn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AFK25_05965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:agn03019]
    AFK25_05965
Messenger RNA biogenesis [BR:agn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AFK25_05965
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 eIF-1a Mur_ligase_C P8
Other DBs
NCBI-ProteinID: AKS38104
UniProt: A0AAW7THZ5
LinkDB
Position
1114477..1116138
AA seq 553 aa
MKQAEKIRVFALGGVGEVGKNMYVVEVDEDIFVLDAGLMFPEDEMFGIDMVIPDITYLVE
QQERIRGIFLTHGHDDHIGAIAYVLRKITVPVYGAKLTLALMEEKLKEQGITSKAKRIEI
NANSEIVFDKAVVSFFQTNHSIPDCLGVSIHTSQGAIVYTSDFKFDQTPVGICRTDFGKM
AQIGAQGVLCLLSDSTNAEKPGYTGSEAIVGQEISDVIYNANGRIIVACFASNITRIQQV
LNAARDHRRKVVIMSRHMHKVIDIAVRLGYLKFDENMIIPMSEVDRYDDRDLVILTTGNQ
GEPMAALARMAKQAHKYINIKEGDTVIVASSPMPGHELFIARTIDALYRAGANVVYGQRQ
VHVSGHGYQEELKLMINFMKPKYFIPVHGEFRMQKAHGKIAQAVGIRQDAIFLIEKGEVI
EFRNGHARFGGKVPSGQILIDGLGVGDVGNIVLRDRRLLSQDGIMIVVVTLSKQQKRIVA
GPEMISRGFVYVRESETLFEESVKIVKEIVEKSMEDYVMEWSSLKTNIRDALSQYLFEKT
KRKPMILPIIMEV
NT seq 1662 nt   +upstreamnt  +downstreamnt
atgaaacaagcagagaaaattcgtgtatttgccctcggcggcgttggagaggtaggaaaa
aatatgtatgtcgtcgaggtggatgaagacatttttgtcttagatgcaggactcatgttt
ccagaggatgaaatgttcggcattgatatggtcattcctgatattacgtatttagtggag
caacaagaacgcattcgaggcatttttttaacgcacggtcatgacgatcatattggggcg
atcgcgtatgtactgcggaaaattactgtccctgtgtacggggcgaaattaacgctcgcg
ctcatggaagaaaaattaaaagagcaaggaattacatcgaaagcaaagcgcatcgaaata
aacgcgaatagcgaaattgtattcgataaggctgtcgtatcgttttttcaaacaaatcat
agcattccagattgtctcggcgtgagcattcatacgtcccaaggcgccattgtatatacg
agcgattttaaatttgatcaaacgcctgttggcatatgtcgtacggattttggtaaaatg
gcgcaaatcggagcgcaaggagtgctttgcttactatccgatagcacgaatgcggaaaaa
ccgggatatacgggttctgaagcgattgtcggacaagaaatttccgatgtcatttacaat
gcgaacggacgcattattgttgcttgctttgcatcaaacattacgcgcattcaacaagtg
ttaaatgctgcacgcgatcatagacgaaaagtcgtcattatgagccgtcatatgcataaa
gtaattgatattgccgtgcgtcttggatatttaaaattcgatgaaaatatgatcattccg
atgagcgaagtagatcgttacgatgatcgggatttagtcattttaacgacaggcaaccaa
ggagaaccaatggcggcgcttgcacgcatggccaaacaggcgcacaaatacatcaatatt
aaagaaggagacacagtgattgtcgcttcttctccaatgccgggacatgagttatttatt
gctcgtacaattgatgctttatatcgtgcaggagcgaatgtcgtgtacggtcaacgtcaa
gtgcatgtgtctggacacggataccaagaagaattgaagttaatgattaatttcatgaag
ccgaaatatttcattccggtacatggagagtttcgcatgcaaaaggcgcatgggaaaatt
gcccaagcggtcggcattcgccaagatgcgatcttcttaattgaaaaaggagaagtgatc
gaattccgtaacggtcacgcccgttttggcggcaaagtgccaagcggtcaaattttaatt
gacggattaggcgttggcgatgtaggaaatatcgtattgcgcgatcgccgcttactttca
caagatggaattatgattgttgttgttacattaagtaaacagcaaaaacgcattgttgcc
ggtccagaaatgatttctcgcggttttgtatatgtgcgtgaatcggaaacgctttttgaa
gaatccgttaaaattgtgaaagaaattgttgaaaaaagcatggaagactatgttatggaa
tggtcttcattaaaaacaaatattcgtgacgcactaagccaatatttatttgaaaaaaca
aaacgaaagccgatgattttaccaattattatggaagtgtaa

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